Pseudomonas fragi: AV641_20425
Help
Entry
AV641_20425 CDS
T04285
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pfz02000
]
AV641_20425
Transporters [BR:
pfz02000
]
Other transporters
Pores ion channels [TC:
1
]
AV641_20425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AMB81854
LinkDB
All DBs
Position
4544215..4546293
Genome browser
AA seq
692 aa
AA seq
DB search
MSRFTVAARLPHAQTVFPFALSALCCALFAPAVMADEHAEHANEISPLVITAIAPSSPLT
IVTNPKDPRQPVPASDGGDYLKTIPGFALVRNGGTNGDPVLRGMFGSRLNILTNGGMMLG
ACPGRMDAPTSYISPETYDQLTVIKGPQTVLWGPGASAGTILFEREPEHFGELGTRVNAS
VLAGSNGRFDKTVDAAAGGPLGYVRVIGNTAHADDYKDGNGDTVPSRYDKWNGDVALGWT
PDPDTLLELTAGKGDGQARSAGRGMDGSQYQRESLGLRFEKSNIGDVLDKIEAQVYYNYA
DHVMDNYSLRTPSGTGMMSGPMASNVDRRTLGARIKATWHWADYQLISGIDAQTNEHRKR
SGMGIDTYKDQNWSKDADFHNYGAFGELTWYAAERDRVITGARLDRAAAKDYRARIGSGM
MSKANPTLDKTRADTLPSGFVRYEHDLADSPATVYAGLGHAERFPDYWELFSPTSGPAGS
VNAFDAIKPEKTTQLDVGLQYKTRDLEAWVSAYAGVVHDYILFDYDSGSSRAQNINARIM
GGELGAAYQLTAHWKADATLAYAWGKNTTDGKALPQMPPLDSRLGLTYSQDDWSAGALWR
LVAPQDRIDRNAGNVVGKDYDKSAGFGVFSLNGAYRINKNLKVSAGVDNLLDKNYSEHLN
MAGNAGYGYPANDPTPINEPGRTLWTKVDVSF
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgctttactgttgccgcccgtttgccccacgcccaaacggtattccctttcgcc
ctgagcgcactgtgctgcgcattgttcgcacctgcggtcatggccgacgaacacgcagag
cacgccaacgaaatcagcccgctggtgatcacggccatcgcccccagctcgccactgacc
atagtcaccaaccccaaggacccgcgccagccggtgccggccagtgacggtggcgactac
ctcaagaccattcccggcttcgccctggtccgcaacggtggcaccaacggcgacccggta
ttgcgcggcatgttcggttcacgcctgaacattctcaccaacggcggcatgatgctcggc
gcctgccccggccgcatggacgcccccacttcctacatctcgccggaaacctacgaccag
ctgaccgtgatcaagggcccgcaaaccgtactctggggcccgggggcatcggccggcact
atcctgttcgagcgcgaaccggagcacttcggcgaactgggcacccgtgtcaatgccagt
gtcctggccggttccaacggccgcttcgacaagaccgtcgacgccgccgccggcggcccg
ctgggctacgtgcgggtgatcggcaacaccgcgcacgctgatgactacaaggacggcaac
ggcgacaccgtgccgtcgcgctatgacaagtggaacggcgatgtagcactgggctggacc
ccggacccggacaccctgctggagctaactgccggcaagggcgatggtcaagcccgctct
gccgggcgcggcatggacggcagccagtaccagcgcgaaagcctgggcctgcgcttcgaa
aaatcaaatatcggcgatgttctcgacaagatcgaagcacaggtctactacaactatgcc
gaccacgtcatggacaactacagcctgcgcaccccgtcgggcaccggcatgatgagcggc
cccatggcctccaacgtcgaccgccgcaccctcggcgcacggatcaaggccacctggcac
tgggccgactaccagttgatcagcggtatcgatgcgcagaccaacgaacaccgcaaacgc
tccggcatgggcatcgatacctataaggatcagaactggagcaaggacgccgacttccat
aactacggtgcttttggcgaactgacctggtacgccgccgagcgtgaccgggtcattacc
ggagcccgcctggaccgcgctgcagccaaggattaccgcgcccggatcggctccgggatg
atgagcaaagccaacccgaccctggataaaacccgcgccgacacactgcccagcggcttt
gtgcgttacgaacatgatctggccgacagtccggccacggtctatgccggcctgggtcac
gccgaacgtttcccggattactgggagctgttctccccgacctcaggcccggccggctcg
gttaacgctttcgatgcaatcaagccggaaaaaaccactcagctcgatgtgggcctgcaa
tacaaaacccgcgatctcgaagcctgggtctcggcctatgccggggtcgttcacgattac
atcctgttcgactacgactcgggttcgtcccgggcgcaaaacatcaacgcccggatcatg
ggcggcgaactgggtgctgcgtatcagctgactgcacactggaaagccgacgccaccctg
gcctacgcctggggcaagaacaccacggacggcaaggcactgccgcaaatgccaccgctg
gacagccgcctgggcctcacttacagccaggacgactggagtgccggggccttgtggcga
ctggtggcaccgcaagaccgcatcgaccgtaatgccggcaatgtggtcggcaaggactac
gacaagagtgccggttttggcgtgttctcgttgaacggcgcgtaccgcatcaacaaaaac
ctcaaggtcagtgccggcgtcgacaacctgctggataaaaactacagcgagcacctgaac
atggcgggcaacgccggctacggctacccggcaaacgacccgaccccgatcaacgagccg
gggcgcaccttgtggaccaaggttgacgtgagcttctga
DBGET
integrated database retrieval system
