KEGG   Pseudomonas fragi: AV641_20860
Entry
AV641_20860       CDS       T04285                                 
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
pfz  Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:pfz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pfz03032]
    AV641_20860
   03036 Chromosome and associated proteins [BR:pfz03036]
    AV641_20860
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pfz02048]
    AV641_20860
Enzymes [BR:pfz01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     AV641_20860
DNA replication proteins [BR:pfz03032]
 Prokaryotic type
  DNA Topoisomerases
   AV641_20860
Chromosome and associated proteins [BR:pfz03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    AV641_20860
Prokaryotic defense system [BR:pfz02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    AV641_20860
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3 TOPRIM_C HATPase_c_2
Other DBs
NCBI-ProteinID: AMB81350
LinkDB
Position
complement(4639140..4641044)
AA seq 634 aa
MATPSASSYNADAIEVLSGLDPVRKRPGMYTDTSRPNHLAQEVIDNSVDEALAGHAKSVQ
VILHADHSLEVSDDGRGMPVDIHPEEGVSGVELILTKLHAGGKFSNKNYQFSGGLHGVGI
SVVNALSTLVRVKVKRDGNEYQMTFADGYKATDLEVVGTVGKRNTGTSVFFAPDPKYFDS
PKFSVSRLKHVLKAKAVLCPGLLVSFEDKGTGEKIEWHYEDGLRSYLVDAVSEFERLPDE
PFCGSLAGNKEAIDWALLWLPEGGDSVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE
FRSLLPRGVKLAPEDVWERIAFVLSMKMQEPQFSGQTKERLSSREAAAFVSGVIKDSFSL
WLNANPELGMQLAELAINNAGRRLKASKKVERKRITQGPALPGKLADCAGQDPMRSELFL
VEGDSAGGSAKQARDKEFQAILPLRGKILNTWEVDGSEVLASQEVHNIAVAIGVDPGAAD
ISQLRYGKICILADADSDGLHIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKEIF
YALDEAERDGIIDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLEDY
AATSEMMDMLLAKKRAGDRKSWLESKGNLAQVLA
NT seq 1905 nt   +upstreamnt  +downstreamnt
atggccactcccagcgctagctcttataacgccgacgccatcgaagtcctctcgggcctc
gacccggtgcgcaaacgtcccggcatgtacaccgataccagccggcccaaccacctggcc
caggaagtcatcgataacagtgtcgacgaagccctggccggtcacgccaaatcggtgcag
gtcattctgcacgccgatcactcgctggaagtcagtgatgacgggcgcggcatgccggtg
gacattcaccccgaagaaggggtgtcaggggtcgagctgatcctcaccaagctccatgcc
ggcggcaagttttccaacaagaactaccagttctccggcggcctgcacggcgtggggatt
tcggtggtcaacgcgctgtcgaccctggtgcgggtcaaggtcaagcgtgacggcaacgag
taccagatgacctttgccgatggctacaaagccaccgacctggaagttgtcggcactgtc
ggcaagcgcaataccggtaccagcgtgttctttgcgccggaccctaaatacttcgattca
cccaagttttcggtcagccgtctcaagcacgtgctcaaggccaaggccgtattgtgcccg
gggctgctggtcagtttcgaggacaagggcaccggcgaaaagatcgagtggcactacgaa
gacggcctgcgctcctatctggtggatgcggtcagcgaattcgagcgcctgcctgacgag
ccgttctgtggcagcctggcgggcaataaagaagccatcgactgggcgctgttgtggctg
cccgaaggcggcgacagtgttcaggaaagctacgtcaacctgatcccgacggcccagggc
gggacccacgtcaacggactgcgccagggcttgctcgatgccatgcgcgagttctgtgaa
ttccgcagcctgctgccccgtggcgtcaagctggcccccgaagatgtgtgggaacgcatt
gcgttcgtgctgtcgatgaaaatgcaggaaccgcaattctcgggccagaccaaagagcgt
ctgtcgtcccgtgaggcggccgctttcgtctcgggtgtgatcaaggactccttcagtctg
tggctcaatgccaaccccgagttgggcatgcagctggcagaactggcaatcaacaacgcc
gggcgcaggctcaaggccagtaaaaaggtcgagcgcaaacgcatcacccaggggccggcc
ctgccgggcaagcttgcggactgtgccgggcaggacccgatgcgctccgagctgtttctg
gtggagggtgactccgccggcggttcagccaagcaggcccgggacaaagagttccaggcc
atcctgccgttgcgcggcaagatccttaacacctgggaagtcgacggcagcgaagtgctg
gccagccaggaagtgcacaacatcgcggtagccatcggggttgatccgggcgcggccgac
atcagccagctgcgctacggcaagatctgcatcctcgccgacgccgactcggacggtctg
cacattgccaccttgctctgtgcattgttcgtgcagcacttccgcccgctggtggatgcc
ggtcacgtgtatgtggccatgccgccgctgtaccggatcgacctgggcaaagagattttc
tacgccctggacgaagccgagcgtgatggcatcatcgaccgtctggtggccgagaagaag
cgtggcaaaccgcaggtcacgcgattcaaaggtctgggtgaaatgaacccgccgcagctg
cgtgaaaccaccatggacccgaacacccggcgtctggtgcagctgacgcttgaagattac
gccgccacgtcggaaatgatggacatgctgctggcgaaaaaacgcgccggtgaccgcaag
tcctggctcgaatccaaaggcaacctggcgcaggtgctggcctga

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