Pseudomonas fragi: AV641_22520
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Entry
AV641_22520 CDS
T04285
Name
(GenBank) GntR family transcriptional regulator
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pfz
Pseudomonas fragi
Brite
KEGG Orthology (KO) [BR:
pfz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfz03000
]
AV641_22520
Transcription factors [BR:
pfz03000
]
Prokaryotic type
Helix-turn-helix
GntR family
AV641_22520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
AMB81653
LinkDB
All DBs
Position
complement(5021916..5023463)
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AA seq
515 aa
AA seq
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MPDSALSIAFNPAGIELDPKKGLTRQLYQALRQRVLDGRLGSGSRLPASRDLALALGISR
NSVVRAYDQLYAEGFLEGRIGDGTYVAQLPEKALPRKKLSTNLSTGFSTGLSPGLSTKKA
DLPVITSSKVIHSTALDRVGQHSLDLPPSGVPRAFRVGVPAFDLFPFEVWSKLQAAFWRK
PDLQQLCYGNPAGDERLRELIAVYLRTSRGLSCSADQILITSGAQQGISLCAQLLVEPGD
GVAVENPGYRAAAHAFAIAGAKMQGIAVDQEGMDCSALKQLNNCRLAYVTPSHQYPTGVT
MSLARRLELLDWAERNQGWIIEDDYDGEYRYYGAPLAPLAALDRQGRVIYVGTFGKVVFP
ALRLGYLVLPKGLIEPFARRRSLDMRHSEVSTQAVMAEFMAAGHFQRHIRRMRRAALSRR
NALLADWPQGVAGMGPVPSIAAGLHVTVPVISFEREQQLLAQAKAAEVEINGLSGYWLQD
SSVPVDKRAGLVLGFAAVPEADIKAALARLGKVWV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgccggattcagcgctgtccatcgccttcaaccctgccggtatcgagcttgatccaaaa
aaaggcctgacccgccagctctatcaggcattgcgccagcgggtactggatggccgcctt
ggcagtggctcgcggttgccggcgagtcgcgatctggccctggcgctcggcatctcccga
aacagcgtggtacgggcctatgaccagttgtatgccgagggctttctcgaggggcgaatc
ggtgatggcacttatgtcgcgcagttgccggaaaaagccctcccgcgaaaaaagttgtcc
accaacttgtccacagggttttcaacaggcttatccccagggttatccacaaaaaaggct
gatttacctgtaattacgtccagtaaagttatccacagcactgctttggacagggttggc
cagcactcgcttgaccttcctccgagcggagttccgcgagctttccgggtgggggtgcca
gcctttgacttattccctttcgaggtctggagcaagctgcaggcggctttttggcgtaag
ccggacttgcagcagctgtgttatggcaatccggcaggggatgagcggctgcgtgaatta
attgccgtctatttgcgcacttcccgtggtttatcgtgctcggccgatcaaattttgatc
accagtggcgcgcagcaaggaattagcctttgtgcacagctgctggttgagcctggcgac
ggggtggcggtcgagaatcccggctaccgcgcagcggcccatgcctttgcgattgcaggg
gcaaaaatgcagggcatagcggtcgatcaggagggtatggattgctcggcactcaagcag
ttgaataactgccggctggcctatgtgacgccatcccaccagtacccgacgggtgtcacc
atgagtctggccaggcgccttgagttgctggactgggccgagcgcaaccagggctggatc
atcgaagacgattacgacggcgagtaccgttactacggggccccgctggccccgttggcg
gcactggaccgtcaggggcgggtgatctatgtcggtaccttcggcaaagtggtgttcccg
gccttgcgtctggggtacctggtcttgcccaagggtttgattgagcctttcgcccggcgg
cgctccctggatatgcggcattcggaggtcagtacccaggccgtgatggccgaattcatg
gctgccgggcactttcagcggcatatccggcgcatgcggcgtgcggccttgagccggcgt
aatgcattgttggcagattggccccagggggtagcggggatggggccggtgccgagcatt
gcagcggggctgcatgtgacggtgccggtcataagtttcgagcgcgaacagcaattgctg
gctcaggccaaagcggccgaggtggagatcaatggtttgagtggctactggctgcaagac
tcgagcgtgcctgtggataaacgtgcagggctggtgctgggttttgccgcggtgcctgag
gccgatatcaaggcagcgctggcccgcctgggcaaggtctgggtgtag
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