Phaeobacter inhibens DSM 17395: PGA1_65p00250
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Entry
PGA1_65p00250 CDS
T02192
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase RfbC
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00521
Streptomycin biosynthesis
pga00523
Polyketide sugar unit biosynthesis
pga00541
Biosynthesis of various nucleotide sugars
pga01100
Metabolic pathways
pga01110
Biosynthesis of secondary metabolites
pga01250
Biosynthesis of nucleotide sugars
Module
pga_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PGA1_65p00250 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PGA1_65p00250 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PGA1_65p00250 (rfbC)
Enzymes [BR:
pga01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PGA1_65p00250 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AFO93607
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All DBs
Position
pPGA1_65:complement(31810..32445)
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AA seq
211 aa
AA seq
DB search
MCLSRGVTRVWALGQKTGPRQQIGGEGMQIEDTDLPGVKILTPARFGDARGFFCESWNKA
RMAEAGLDFDFVQDNHSLSMEVGTLRGLHFQAPPHAQAKLVRCGQGALFDVAVDIRKGSP
TYGRWTGVELSAANGRQLLIPAGFLHGFITCSPGTEVLYKCDAYYAPDCDGGVAWDSCGI
DWGFDGTPVLSEKDARAPRFEDFDSPFVWEG
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgtgcctttcccgtggcgtcacgcgcgtctgggcgttaggacagaagacaggaccacgg
cagcagatcgggggagagggcatgcagattgaagacacggacctgccaggggtgaagatc
ctgacaccggcgcggtttggcgatgcgcgggggtttttctgcgagagctggaacaaggcg
cggatggccgaggcggggctggatttcgatttcgtgcaggacaatcattcgctgtcgatg
gaggttggcaccctgcgtgggctgcattttcaggcgccaccccatgcccaggccaagctg
gtgcgctgcggccagggggcgctgtttgatgtggcggtggatatccgcaaaggctcgccc
acatacgggcgctggaccggggtggagctgtcggcggcaaacggccgccagctgctgatc
ccggcggggttcctgcatgggttcatcacctgcagccccggcaccgaagtcctgtataaa
tgcgatgcgtattacgcgccggactgtgacggcggggtggcctgggacagctgcggtatt
gactggggctttgacggtacaccggttctttctgaaaaggacgccagggcgccccggttt
gaagacttcgacagccccttcgtgtgggaaggataa
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