Phaeobacter inhibens DSM 17395: PGA1_78p00310
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Entry
PGA1_78p00310 CDS
T02192
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00260
Glycine, serine and threonine metabolism
pga00630
Glyoxylate and dicarboxylate metabolism
pga00670
One carbon pool by folate
pga00785
Lipoic acid metabolism
pga01100
Metabolic pathways
pga01110
Biosynthesis of secondary metabolites
pga01200
Carbon metabolism
Module
pga_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PGA1_78p00310 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PGA1_78p00310 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PGA1_78p00310 (gcvP)
00670 One carbon pool by folate
PGA1_78p00310 (gcvP)
Enzymes [BR:
pga01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PGA1_78p00310 (gcvP)
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SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF489
Motif
Other DBs
NCBI-ProteinID:
AFO93552
LinkDB
All DBs
Position
pPGA1_78:36728..39583
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AA seq
951 aa
AA seq
DB search
MAFKLTDYEAYDFANRRHIGPSPREMADMLKVIGFNTLDELIDATVPPAIRQTEALDWGP
AMTERDALFHMKEIAGKNKVLTSLIGQGYHGTTTPAPILRNILENPAWYTAYTPYQPEIS
QGRLEALLNFQTMVSDLTGLPVANASLLDEATAAAEAMAMAHRGSRSKANNAAFFVDKNC
HPQTVAVIKTRAEPLGIDVVVAEPTELDAGAVFGAIFQYPGTHGHVTDFSDQIAALHEHK
GIAVVAADILSLALLKSPGEMGADIAIGSTQRFGVPMGYGGPHAAYMATSDKLKRSMPGR
IIGVSIDARGNKAYRLSLQTREQHIRREKANSNVCTAQALLAVIASMYAVYHGPDGIKAI
AQSVHRKTARLAAGLEEAGFKVEPEVFFDTITVEVGHLQKTVMEAAVQRGINLRRVGETK
VGISLDEQTRPETIEAVWGAFGIDRKDDSSNKQYRLPEAMLRDSAYLTHPIFHKNRAEAE
ITRYMRRLADRDLALDRAMIPLGSCTMKLNATIEMIPVTWPEFSNLHPFVPEDQAQGYHQ
MIDDLNDKLCQITGYDAISQQPNSGAQGEYAGLLTIRNYHASRGQAHRNVCLIPTSAHGT
NPASAQMVGWKVVPIKADDNGNIDVADFREKAEKHSDHLAGCMITYPSTHGVFETTVQEV
CQITHDHGGQVYIDGANMNAMVGVSRPGDIGGDVSHLNLHKTFCIPHGGGGPGMGPIGVK
AHLTEHLPGHPEYGTAVGPVSAAPFGSPSILPVSWAYILLMGGSGLTQATKVAILNANYI
AARLQDAYPILYTSESGRVAHECILDTRPLNDEAGVSVDDVAKRLIDSGFHAPTMSWPVA
GTLMVEPTESEPKDELDRFCEAMLSIRSEAQDIIDGKIDAENNPLKHAPHTVRDLVGEWD
RPYSREQACFPPGNLGVDKYWPAVNRVDNAYGDRNLICTCPPMEDYAEAAE
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaaactgactgattacgaagcctacgactttgccaatcgccgccacatcggg
cccagcccgcgtgagatggccgatatgctgaaggtgatcggcttcaacacgctcgatgag
ctgatcgacgccaccgtgccgcccgccatccgccagacagaggcgctggactggggtccg
gcgatgaccgaacgcgatgcgctcttccacatgaaagagatcgcgggcaagaacaaggtg
ctgacctccctgatcggtcagggctaccacggcaccaccacacccgcgccgatcctgcgc
aacattctggaaaaccccgcctggtacacggcttacacgccttaccagcccgagatttca
cagggccgccttgaagcgctgttgaacttccagaccatggtcagcgatctgaccggcctg
ccggtagccaatgcgtcgctgctcgacgaagccaccgccgctgccgaagccatggcgatg
gcccatcgtgggtcgcgctccaaggcgaataacgcagccttcttcgtggacaagaattgc
cacccgcagaccgttgctgtgatcaagacccgcgccgaacctctgggcatcgacgttgtg
gtcgccgaaccgaccgagctggatgcaggcgccgtctttggcgcaatcttccagtatccg
ggcacccatggccacgtcaccgatttcagcgaccagatcgctgccctgcacgaacacaag
ggcatcgcggttgtggccgccgacatcctgtcgctggcgctgctgaaatcccccggtgaa
atgggcgcagatatcgccatcggctccacccagcgctttggcgttcccatgggctacggc
ggcccgcacgccgcctatatggcgacctcggacaagctgaaacgctccatgccgggccgg
atcattggtgtgtccatcgacgcgcgcggcaacaaggcctatcgcctgtcgctgcagacc
cgcgaacagcacatccgccgcgaaaaagccaactccaacgtctgtaccgcacaggcgctg
ctggcggtgatcgcatcgatgtatgccgtctaccacggtcccgatggcatcaaggcgatt
gcccagtccgtacaccgcaagactgcgcgtctggcggctggtctggaagaggccgggttc
aaggttgaaccggaagtgttctttgacaccatcaccgtcgaagttggccacctgcagaaa
accgtcatggaagccgccgttcagcggggcatcaacctgcgccgcgtcggcgaaaccaag
gtcggtatctcgctggacgaacagacccgccccgaaaccatcgaggccgtctggggtgcc
tttggcatcgatcgcaaggacgacagctccaacaagcagtaccgtctgcccgaagccatg
ctgcgcgacagcgcgtatctcacgcacccgatcttccacaagaaccgggccgaggcagag
atcacacgctacatgcgccgtctggccgaccgcgatctggcgctggaccgcgcgatgatc
ccgcttggctcctgcaccatgaagctgaacgcgaccatcgagatgatcccggtcacctgg
ccggaattcagcaacctgcaccccttcgttcctgaagatcaggcgcagggttaccaccag
atgatcgacgatctgaacgacaagctgtgccagatcaccggctatgacgcgatttcccag
cagccgaactccggtgcgcagggcgaatacgcgggcctgttgacgatccgcaactaccac
gcatcgcgtggccaggcgcatcgcaacgtctgcctgatcccgacctctgcccatggcacc
aacccggcctccgcacagatggtgggctggaaagtggttccgatcaaagcggacgacaac
ggcaacatcgacgtcgcggacttccgtgaaaaggcagagaaacactctgaccacctcgcg
ggctgcatgatcacctacccttccacccatggcgtgttcgagaccaccgttcaggaggtc
tgccagatcacccatgatcacggcggccaggtctatatcgatggcgccaacatgaacgca
atggtgggtgtgtcccgtccgggtgatattggcggtgacgtcagccacctgaacctgcac
aagaccttctgcattccgcatggtggtggtggccccggcatgggtccgatcggcgtcaag
gcgcatctgaccgaacacctgccgggtcacccggaatacggcaccgccgtgggtcctgtc
tcggcagcaccgttcggctcgccctcgatcctaccggtcagctgggcttatatcctgctg
atgggtggttctggtctgactcaggcgaccaaggtggcgatcctcaacgccaactatatc
gctgcgcgtctgcaggatgcctatccgatcctctacacctccgaatccggtcgtgtggcg
catgagtgcattctggacacccgtccgctgaatgacgaggccggcgtctccgttgacgat
gtggccaagcgcctgatcgacagcgggttccacgcgccgaccatgtcctggccggtggca
ggtaccctgatggtggagccgacggaatccgaacccaaggatgagctggaccgcttctgc
gaagccatgctgtccatccggtcggaagcgcaggatatcatcgacggtaagatcgatgcc
gaaaacaacccgctgaagcacgcaccacataccgtgcgcgatctggttggtgagtgggat
cgcccctactcgcgcgagcaggcttgcttccctccgggcaacctcggtgttgataaatac
tggccggcggtgaaccgcgtcgacaacgcttatggcgaccgcaacctgatctgcacctgc
cctccgatggaggactacgcagaggcggctgaataa
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