KEGG   Phaeobacter inhibens DSM 17395: PGA1_c01180
Entry
PGA1_c01180       CDS       T02192                                 
Name
(GenBank) hypothetical protein
  KO
K06958  RNase adapter protein RapZ
Organism
pga  Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:pga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pga03019]
    PGA1_c01180
Messenger RNA biogenesis [BR:pga03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     PGA1_c01180
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 AAA_16 Rad17 AAA_22 SKI DUF2642
Other DBs
NCBI-ProteinID: AFO89864
LinkDB
Position
111462..112352
AA seq 296 aa
MRDPDIACDPTAVPIVLVTGPSGAGRTTAINVLEDLGFEAIDNLPLRLLPGLVDANSLTR
PMALGLDSRNRDFSPAALLDVIDMLSARRDLDLTVLYLDADREVLLRRYSETRRRHPLAP
AEDPEVGVLREIDLMLPIRDRADLLLDTSELNIHQLKADIERRFAPGGRSLAVSLQSFSY
KRGVPRSIDMVFDCRFLRNPYWEQSLRSLDGRDVAVQSYVREDSRYEPFFDRVLDLIRLL
LPAYREEGKSHLSIAFGCTGGQHRSVTLAETLAKDLAEDGQQVSIRHRELHSPRQK
NT seq 891 nt   +upstreamnt  +downstreamnt
atgcgtgacccggatattgcctgcgacccgacggcggtgccgatcgtcctggtgacaggc
ccgtctggtgcagggcgcaccactgcgatcaatgtgcttgaggatctcgggtttgaggcg
attgacaaccttccgcttcggctgctgccgggactggttgacgccaacagcctgactcgc
ccgatggcgcttggactcgacagccgcaaccgggatttctccccggcggcgctgcttgat
gtcatcgatatgctgtcagcgcgccgggatcttgatctgaccgtgctgtaccttgatgcc
gaccgtgaagtcctgctgcggcgctattcggaaacgcgcaggcggcacccgcttgctccg
gcagaagatccggaggtcggggtcttgcgtgagattgatctgatgctgccgatccgcgac
cgcgctgacctgttgctggatacctccgaattgaacatccatcagctaaaggcggatatc
gaacggcgctttgcccccggcgggcggtccttggctgtgtccttgcagagcttttcctat
aaacgcggcgtgccgcgcagtatcgatatggtgtttgattgccgctttctgcgcaaccct
tactgggaacagagcctgcgcagtctagacgggcgcgacgtggcggtacagtcttacgtt
cgtgaggacagccgctatgagccgttcttcgatcgggtgctggatctgatccgcttgctg
ttgcctgcctaccgagaagaaggtaaatcgcatctctctatagcatttggatgcaccgga
gggcagcaccgctcggtcacactggcagaaaccctggcaaaggatcttgcggaagacggg
cagcaggtgtcaattaggcaccgcgagctgcacagcccgcgacagaagtga

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