Phaeobacter inhibens DSM 17395: PGA1_c04710
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Entry
PGA1_c04710 CDS
T02192
Symbol
miaB
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pga
Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pga03016
]
PGA1_c04710 (miaB)
Enzymes [BR:
pga01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
PGA1_c04710 (miaB)
Transfer RNA biogenesis [BR:
pga03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
PGA1_c04710 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
AFO90205
LinkDB
All DBs
Position
463081..464403
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AA seq
440 aa
AA seq
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MSAPKKLFIKTYGCQMNVYDSERMAEALGGEGYVETKSPDDADMILLNTCHIREKAAEKV
YSELGRFKGLKAEKPDLKIGVAGCVAQAEGQEIMRRQPLVDLVVGPQSYHRLPEMEAKAR
EGEKVLDTDFPEEDKFEKLKNRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPA
DRILREAQDLVERGVREITLLGQNVNAYHGAGPNGDMTLAQLIWELDKVDGLERIRFTTS
HPNDMQDDLIEAHGTCAKLMPYLHLPVQAGSDKILKRMNRAHTAESYLRLIERIRAARPD
ILISGDFIVGFPEETEADFQATLDLVEEVKYGTAYSFKYSTRPGTPAAERPQVDPKEADD
RLQRLQALLTTQQREVQDSMVGRDVTVLFEKAGRFPGQMVGKSDYLHAVHVADCDRAIGD
LARVRILSSGANSLAGALID
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccgaagaagctgtttatcaagacctatggctgtcagatgaatgtctatgac
agtgaacgcatggccgaggcgctgggtggcgaaggctatgtagaaaccaaatcgcccgat
gatgcggatatgatcctgctgaacacctgccatatccgggagaaggccgctgaaaaagtc
tattccgaactgggccgcttcaaggggctgaaggcggagaaaccagatctgaagatcggc
gttgcaggctgtgttgcgcaggccgaagggcaggaaatcatgcgtcgccagccgctggtt
gatctcgtggtcggtccgcaaagctatcatcgcctgccagaaatggaagccaaggcgcgg
gaaggggagaaggtgctcgacaccgactttcccgaagaagacaaattcgagaagttgaaa
aaccgccccaaggccaagcgcggtccgacagcgttcctgaccgtgcaggaagggtgtgac
aaattctgcgccttctgcgtggtgccctacacccgtggcgccgaggtctcgcgcccggca
gaccgtattctgcgagaggcgcaggatctggtcgagcgtggggtgcgcgaaatcaccctt
ctgggtcagaatgtgaatgcctatcacggtgccggacccaatggcgacatgacgctggcg
cagctgatctgggagttggacaaggtcgacgggctggagcgcatccgcttcaccacgtcg
catcccaatgacatgcaggatgacctgattgaggcgcatggcacctgtgccaaactgatg
ccttatctgcacctgccggtgcaggcgggatccgacaagatcctcaaacggatgaaccgt
gcacataccgccgaaagctatctccgcttgatcgagcgcatccgcgccgcgcggcctgat
atcctgatctctggcgattttatcgttggcttcccggaagagaccgaggcggatttccag
gccactttggatctggtggaagaggtgaaatatggtaccgcctattccttcaaatactcc
acccgcccgggtaccccggcggcggaacgtccgcaggtcgatcccaaagaggcagacgac
cggcttcagcgcctgcaggccctgctgacaacgcagcaacgcgaggttcaggacagcatg
gtaggccgtgacgtcaccgtgctgttcgagaaagcgggacggttccccgggcagatggtt
gggaaatccgactatctgcatgcggtccatgtcgcggattgcgaccgggctatcggggat
cttgcccgcgtgcggatcctgtcctccggcgccaactcgctggcgggtgcgctgatcgac
tga
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