KEGG   Phaeobacter inhibens DSM 17395: PGA1_c06040
Entry
PGA1_c06040       CDS       T02192                                 
Name
(GenBank) putative DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pga  Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:pga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pga03400]
    PGA1_c06040
Enzymes [BR:pga01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PGA1_c06040
    5.6.2.6  RNA 3'-5' helicase
     PGA1_c06040
DNA repair and recombination proteins [BR:pga03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PGA1_c06040
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 DEXQc_Suv3
Other DBs
NCBI-ProteinID: AFO90334
LinkDB
Position
complement(616845..619280)
AA seq 811 aa
MSRLPDVITDWFSTRGWTIHPHQQEMLARVDDPATLLIAPTGGGKTMAGFLPTLADLATG
DHQGLHTLYVSPLKALAADIKRNLRTPVEDMGLPIRIDDRTGDTPASRKRSQRADPPHIL
LTTPESLALLTSYEDAPRMFAGLKRVVLDEIHALAESKRGDQLMLALTRLQAICPDMRRV
GLSATVDDPAAIAQYLARHPAPCDIVLADPGPAPDIRMLHTDAAPPWAGGGAAHAIPAVL
EQIKAHRTTLIFHNTRAQAEIFFRNLWLANDDALPIGIHHGSLDRVQRDRVEAAMVRGEL
RAVVCTGSLDLGIDWGDVDLVIQIGAPKNVKRLVQRIGRANHRYNAPSKALLVPANRFEV
VECRAALEAVEAGTLDGSPRSPGPRDVLCQHILIRACAGPFAADDLFAEVTGAGAYASLT
RAEFDACLDFCATGGYALRVYDQWQRLLQRPDGLWQLRDPRAARRIRMNIGTIQDADLLK
VRLKRSRGGKPLGEIEEAFAATLTPGDTFLIGGQVVRYESLREMTVEVSRNASKTPKVAV
FSGTKFATSTQLSTRILDILQRDSWPDLPSHTADWLALQRQVSEMPRRGQLLLESFPFRG
REYLCVYGFAGRNAMQTLGLLLTKRMEELSLDPLGFVATDYATLIWGLSPVADPAPLFDP
DKLRAGLDGWLADNAVMKRSFRAVANIAGLIERNTPGQRKSGRQATFSSDILYDTLRKYD
PDHLLLDITRQEALGGLVDFGRIEEMLTRINGNITLNRLSQISPLAAPLLLEVGKVPVKG
AAQEKLLQRETEDLMRLAGLAALEAPAAPEL
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgagcaggcttcccgatgtcatcacggattggttcagcacccgtggctggaccattcat
ccccatcagcaagagatgctggcgcgcgtcgatgatccggcgacattgctgattgccccc
accggtggtggcaaaacgatggctggtttcctgccaacgctggctgatctcgccaccggc
gaccaccagggtctgcacacgctctatgtctcgccgctgaaggcgctggcggcggatatc
aaacgcaacctgcgcaccccggttgaggacatgggcctgcccatccgcattgatgaccgc
accggtgacacccccgccagccgtaagcgcagccagcgcgccgacccaccgcatattctg
ctcaccacgccagaaagcctcgcgctgctcacctcttacgaggacgcaccacgcatgttt
gcggggctgaaacgggtggtactggacgaaatccacgccctcgccgagagcaaacggggc
gatcaactgatgctcgccctgacccgactacaggcgatctgtcccgacatgcgccgcgtc
ggcctttcggccaccgtcgatgaccccgccgccatcgcacaatatctggcccgccacccg
gccccctgcgacatcgtgctggccgatcccggccccgcccccgacatccggatgctgcac
acggacgcggccccgccctgggctggcggcggcgcggcccatgccatccctgccgtgctg
gaacagatcaaggcgcacagaaccacgctgatctttcacaacacccgcgcccaggccgaa
atcttctttcgcaatctctggctcgccaatgatgacgcgctgccgattggcatccaccac
ggctcgcttgatcgggtgcagcgcgaccgggtggaggcggcaatggttcggggagagttg
cgcgccgtagtctgcaccggctcacttgatctgggcatcgactggggggatgtggatctg
gtgatccagatcggcgcgccaaaaaacgtcaagcgactggtgcagcgcatcggccgcgcc
aaccaccgctacaacgccccctccaaggcgctgctggtgcccgccaaccggtttgaggtg
gtggaatgccgcgccgcccttgaggcggtagaggcaggcacgctggacggatcgccacgc
tcccccggcccccgcgacgtcctgtgtcagcacatcctgatccgcgcgtgcgccggtccc
tttgctgccgatgatctgtttgctgaggtcaccggcgctggcgcctatgccagcctcacc
cgcgcagagttcgacgcctgcctcgacttctgcgccaccggcggctacgcgctacgggtc
tatgaccaatggcaacggctgctgcagcgccccgacgggctgtggcagctgcgggacccc
cgcgccgcccgccgtatccgcatgaatatcggcaccattcaggacgccgacctcctgaaa
gtcaggctcaaacgcagccgtggtggcaaacctctgggggaaattgaggaagcctttgcc
gccaccctcacccccggagatacctttctcatcggcgggcaggtggtacgctatgagagc
ttgcgtgaaatgacggttgaggtcagtcgcaatgccagcaagacgcccaaggtggcggtc
ttctccggcaccaaatttgccacctcaacccagctcagcacccgcattctggatatcctg
caacgcgacagctggccggatctgccgtcccataccgccgactggctggcgttgcagcgt
caggtctctgagatgccgcgccggggccagctgctgttggagagctttcccttccggggg
cgcgaatatctctgcgtctatggctttgccgggcgcaacgcgatgcagacgctgggcctt
ttgctgaccaaacgcatggaggagctgtcgctcgacccgctgggctttgtcgccaccgat
tatgccacgctgatctggggtctcagcccggtagccgaccccgcaccgctgttcgacccg
gacaaactgcgcgccggtcttgacggctggttggcggacaatgcggtgatgaaacgcagc
tttcgcgcagtggccaatatcgcaggcctcatcgaacgcaacacccccggccagcgcaag
agcggccgtcaggcgacgttctcctctgacatcctctacgacacattgcgcaaatatgat
cccgatcacctgcttctggacatcacacggcaggaggcgcttggcggtctggtggacttc
ggccgtattgaggagatgctgacgcgcatcaacggaaacatcaccctcaaccgcctgtcg
cagatctcgccccttgcagcccccctgctgcttgaggtcggcaaggtcccggtaaaaggc
gcggcacaggaaaaattgctgcaacgcgagaccgaagacctgatgcgcctcgccggtctg
gcagcgcttgaagccccagccgcaccagagctttga

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