Phaeobacter inhibens DSM 17395: PGA1_c08080
Help
Entry
PGA1_c08080 CDS
T02192
Symbol
cobB
Name
(GenBank) putative cobyrinic acid A,C-diamide synthase CobB
KO
K02224
cobyrinic acid a,c-diamide synthase [EC:
6.3.5.9
6.3.5.11
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00860
Porphyrin metabolism
pga01100
Metabolic pathways
pga01240
Biosynthesis of cofactors
Module
pga_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PGA1_c08080 (cobB)
Enzymes [BR:
pga01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.9 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing)
PGA1_c08080 (cobB)
6.3.5.11 cobyrinate a,c-diamide synthase
PGA1_c08080 (cobB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GATase_3
CbiA
AAA_26
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFO90535
LinkDB
All DBs
Position
complement(837077..838408)
Genome browser
AA seq
443 aa
AA seq
DB search
MADPMTDMNPPGLMISAPSSGTGKTTVMLGLLRALAEDGLVVQPYKSGPDYIDPAFHLAA
AGRPSFNLDTWAMDAGLLDAVTGQAAGAEICIGEGSMGLYDGVATRGQSGFGSSAETAKR
MGWPVVLVVDVGGQAQSAAATALGFKNYDTEVPFAGVILNRVASPRHERLTRLGMEKAGI
KVLGSLPRRGDLALPERHLGLIQAVEHPDLEAAIAGYAAFLRENVDLEAIKSAALAGAAP
AAAKLPLPPAQRIALARDAAFSFTYPHLLTGWRAAGAEILPFSPLADEAPAADADLVWLP
GGYPELHGGTLAAAETFRAGLRKHAETKPVHGECGGYMALGEALIDKEGNRHQMAGLLGL
VTSYEKRKFHLGYRRAVLQAGMPGFAAGTALRGHEFHYSTILDEPDAPLANVMDADGNPV
PETGSIKGHVTGTFFHLITGEQA
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccaatgacagatatgaaccctcccggcctgatgatctcggcaccgtcttcg
ggtaccggcaagaccacggtgatgctgggcctgttgcgggcgttggctgaggacgggctg
gtggtgcaaccctacaagagcgggccggactacatcgacccggccttccaccttgcggcg
gcgggcaggcccagtttcaacctcgacacctgggccatggatgcaggcctgctggatgcg
gtcacgggtcaggcggcgggtgcggaaatctgcatcggtgaaggctccatggggctttat
gacggtgttgccacgcgcgggcagtcgggttttggctcctctgccgagaccgccaagcgc
atgggctggccggtggtgctggtggtcgatgtgggcggacaggcgcaatcggcagcggcc
acagcgctggggttcaagaactatgacaccgaagtgccctttgccggcgtgatcctgaac
cgggtggccagcccgcgtcatgaacggctgacgcgactggggatggagaaggcaggcatc
aaggtactgggttccctgccccggcgtggcgatctggcgctgccggagcggcatctgggc
ctcattcaggcggtggaacatcccgatctggaagcggcgattgcgggctatgcggcgttc
ctgcgcgagaatgtcgatctggaggcgatcaagtcggcggccctcgcaggtgctgctccg
gcggcggcaaaactgcctctgcccccggcgcagcgaattgcgctggcgcgggatgcggcg
ttttcctttacttacccgcatctgctgaccggctggcgcgcggcaggggcagagatcctg
ccattctcgccgctggcggatgaagcacctgcggcggacgccgatctggtctggctgccc
ggcggctatccggaactgcatggcggcaccctcgcggcggcggagactttccgcgcgggg
ctgcgcaaacacgccgagaccaaaccggttcatggcgaatgcggtggttacatggcgctc
ggcgaagcgctgatcgacaaggaaggcaaccggcaccagatggccggccttctgggtctt
gtgacctcctatgagaagcgcaaattccaccttggctatcgccgggctgtgcttcaggcc
ggaatgccgggctttgcggcaggcaccgccctgcgcgggcacgaatttcactattcgacc
attctggacgaacccgatgcgccactggccaatgtcatggacgcggacggcaacccggtg
ccggaaaccggatcaatcaaaggccatgtcaccggcaccttcttccatctgattaccgga
gagcaggcatga
DBGET
integrated database retrieval system
