Phaeobacter inhibens DSM 17395: PGA1_c09560
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Entry
PGA1_c09560 CDS
T02192
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00470
D-Amino acid metabolism
pga00550
Peptidoglycan biosynthesis
pga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PGA1_c09560 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PGA1_c09560 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pga01011
]
PGA1_c09560 (murD)
Enzymes [BR:
pga01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
PGA1_c09560 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pga01011
]
Precursor biosynthesis
Amino acid ligase
PGA1_c09560 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
KARI_N
2-Hacid_dh_C
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AFO90675
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All DBs
Position
981030..982427
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AA seq
465 aa
AA seq
DB search
MIPVTGFEGAKVAVLGLGRSGFATARALREGGAEPVCWDDNPGARARAEVEGFVCRDLQK
AGAFDDIASLVVSPGIPHLYPKPNPVIHAALVAGVPVDNDIGLFFRSVATRGWERFDQAP
RIVAVTGSNGKSTTVALLHHILQEAGRESQLAGNIGRGVLDIDPPGSGGIVVLELSSYQT
DLARALTPDVAVFTNLSPDHLDRHAGMGGYFAAKRRLFAEGGPDRAIIGVDEDEGLYLAG
QLSEAASDDRVIRISASQKLTGLGWQVFARKGFLSEYRKGRQAASIDLRQMQGLPGAHNH
QNACAAYAAARALGLAPRLIEDALASYPGLPHRSQTIATHAGVRYVNDSKATNLDSAVKA
LSAFDNIRWICGGLEKDGGLEALRGQTGKVRKAYVIGREAAGFAMQLDVEAEVCITMAEA
VARASAEAETGDTVLLAPAAASFDQYDNFEQRGEDFIAEVAKLQG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgttacaggttttgagggcgcaaaggtcgccgttttggggctgggccggtcg
ggatttgccaccgctcgggcgctgcgcgaaggcggggcggagcctgtctgttgggacgac
aaccccggcgcgcgggcgcgggccgaggtggaggggtttgtctgccgcgatctgcaaaaa
gccggggcgtttgatgacatcgcctcgctggtcgtctcgccgggtattccgcatctctat
cccaaacccaatccggtgatccatgcggcactggtggcgggcgttccggtggacaatgac
atcgggctgttcttccgctcggttgcgacgcggggctgggaacggttcgatcaggcgccg
cgtattgtggcggtcactggctctaacggcaaatcgaccacggtggcgttgctgcaccac
atcctgcaggaggccggacgcgagagccagctggcgggcaatatcgggcgtggtgtgctg
gacattgatccgccgggatccggcggcatcgtggtgctggagctgtcgagctatcagacc
gatctggcccgcgccctgacgccggatgtggcggtcttcaccaacctcagccccgatcat
ctggaccggcacgcgggcatgggcggctatttcgcggccaagcgacggctgtttgccgaa
ggcgggccggaccgtgcgatcattggcgtggatgaggatgaagggctgtatctggccggt
cagctctctgaggccgccagcgacgaccgggtgatccgcatctcggccagtcagaagttg
accggcctgggctggcaggtctttgcccgcaaggggttcctgagcgaataccgcaagggc
cgacaggcggcgtcgattgatctgcgccagatgcaggggctgccgggcgcgcataaccat
cagaacgcctgtgcggcctatgcggcggcgcgggcgctgggtcttgcgccccgtctgatc
gaggacgcactggcgagctatccgggcctgccgcaccgcagccagaccatcgcgacccac
gcaggcgtgcgctatgtgaatgacagcaaggccaccaaccttgatagtgcggtgaaggcg
ttgagcgcctttgacaatatccgctggatctgcggcgggctggagaaagacggcgggctg
gaggccctgcgtggccagaccggtaaggtgcgcaaggcctatgtcatcggccgcgaggcg
gcaggctttgccatgcaattggacgtcgaggcagaggtttgcatcaccatggccgaggcc
gtcgcccgcgccagcgccgaggcagagacgggcgatacggttctgctggcccctgcggcg
gcgagctttgatcaatacgacaacttcgagcaacgcggcgaggatttcatcgccgaggtg
gcaaagctgcagggctga
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