Phaeobacter inhibens DSM 17395: PGA1_c10590
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Entry
PGA1_c10590 CDS
T02192
Symbol
rhlE1
Name
(GenBank) putative ATP-dependent RNA helicase RhlE
Organism
pga
Phaeobacter inhibens DSM 17395
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
DUF842
Motif
Other DBs
NCBI-ProteinID:
AFO90778
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Position
complement(1096094..1097644)
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AA seq
516 aa
AA seq
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MTKFSDLNLNPKVLKAIEEAGYESPTPIQAGAIPPALEGRDVLGIAQTGTGKTASFTLPM
ITLLARGRARARMPRSLVLCPTRELAAQVAENFDTYTKHLKLTKALLIGGVSFKEQDTLI
DKGVDVLIATPGRLLDHFERGKLILSDVKVMVVDEADRMLDMGFIPDIERIFGLTPFTRQ
TLFFSATMAPEIERITNTFLSAPARVEVARQATTSENITQGVVLFKASRRDREGSEKRKL
LRHLIDQEGEKCTNAIIFCNRKTDVDIVAKSLKKYGYDAAPIHGDLDQSQRTKTLEGFRE
GSLRFLVASDVAARGLDVPSVSHVFNFDVPSHAEDYVHRIGRTGRAGRDGSAMMICVPKD
EKNLEDIERLVQNEIPRIENPLKKAKAEPKAKDSKDDASSETTERKTRSRRPSARSSAAK
DVNESADAQAQISDAPSAEVDAPAQEQKAPEQEKRASGRGKPAESKSSGPKSGQKGNQKS
GRGRGGNDRGNDRNVVGMGDHMPSFIALSFAERRAG
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattttcagatctgaacctgaaccccaaagtactcaaagcgattgaggaagcg
ggttacgaatcccccacccctattcaggcaggggcaattcctcctgccttggaggggcgc
gatgtgctggggattgcacagaccggcaccggcaagactgcctcgttcaccctgccgatg
attaccctgctggcgcgcggtcgcgcccgggcacgcatgccgcgtagcctggtgctctgc
cccacgcgcgagctggcagcacaggtggcggagaatttcgacacctacaccaaacacctg
aaactgacgaaggcgctgctgattggcggtgtttcgttcaaggagcaggacacgctgatc
gacaaaggtgtggacgtgctgatcgccacccccggtcgtctgctcgaccattttgagcgt
ggcaagctgatcctctccgacgtgaaggtgatggtggtggacgaagccgaccggatgctc
gacatggggttcatccccgatatcgaacgtatcttcggcctgacgccctttacccgtcag
acactgttcttctccgccactatggcgccggagattgagcggatcaccaataccttcctc
tctgcccccgcgcgcgtggaagtggcccgtcaggcgacgacgtctgagaacatcacccaa
ggtgtggtgctgttcaaagcatcccgccgggaccgtgagggcagcgagaaacgcaagttg
ctgcgccacctgattgatcaggaaggcgagaaatgcaccaatgcgatcatcttctgcaac
cgcaagacggatgtcgatatcgttgcgaaatcgctgaagaaatacggctatgacgccgcg
ccgattcatggtgatctggatcagagccagcgcaccaaaacactggaaggtttccgcgaa
ggctccttgcggttcctcgtcgcctccgatgtggcggcgcgcggccttgatgtgcccagt
gtcagccatgtgttcaacttcgacgtgccaagccacgcggaggactatgtccaccgcatc
ggtcggaccggtcgtgcaggccgtgacggctccgctatgatgatctgcgtgcccaaggac
gaaaagaacctcgaggacatcgaacgtctggtccagaacgagatcccgcgcatcgagaac
ccgctgaagaaagccaaggccgagccgaaggcaaaagacagcaaggacgatgcaagcagc
gagacgactgagcgcaagacccgcagccgtcggccctccgcccgcagctctgctgccaag
gacgtgaacgagagtgcggacgcccaggcacagataagcgatgcaccgagcgctgaggtc
gatgcaccagctcaggagcagaaggcacctgagcaggagaagcgcgcgtctggtcgtggg
aagcctgcagagagcaaatcttccggtcctaaatcggggcagaagggcaaccagaaatcc
ggtcgtggccgtggcggcaatgaccgtggcaatgatcgcaacgtggttggcatgggggat
catatgcccagctttatcgcgctcagctttgccgagcgccgcgccggataa
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