Phaeobacter inhibens DSM 17395: PGA1_c12020
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Entry
PGA1_c12020 CDS
T02192
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex FadJ subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00071
Fatty acid degradation
pga00280
Valine, leucine and isoleucine degradation
pga00310
Lysine degradation
pga00362
Benzoate degradation
pga00380
Tryptophan metabolism
pga00410
beta-Alanine metabolism
pga00640
Propanoate metabolism
pga00650
Butanoate metabolism
pga00907
Pinene, camphor and geraniol degradation
pga00930
Caprolactam degradation
pga01100
Metabolic pathways
pga01110
Biosynthesis of secondary metabolites
pga01120
Microbial metabolism in diverse environments
pga01200
Carbon metabolism
pga01212
Fatty acid metabolism
Module
pga_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PGA1_c12020 (fadJ)
00650 Butanoate metabolism
PGA1_c12020 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
PGA1_c12020 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PGA1_c12020 (fadJ)
00310 Lysine degradation
PGA1_c12020 (fadJ)
00380 Tryptophan metabolism
PGA1_c12020 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PGA1_c12020 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PGA1_c12020 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PGA1_c12020 (fadJ)
00930 Caprolactam degradation
PGA1_c12020 (fadJ)
Enzymes [BR:
pga01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PGA1_c12020 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PGA1_c12020 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PGA1_c12020 (fadJ)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
DAO
UDPG_MGDP_dh_N
Sacchrp_dh_NADP
F420_oxidored
NAD_Gly3P_dh_N
2-Hacid_dh_C
ApbA
Pyr_redox_2
AlaDh_PNT_C
RS_preATP-grasp-like
NAD_binding_8
FAD_binding_3
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
AFO90920
LinkDB
All DBs
Position
complement(1249462..1251663)
Genome browser
AA seq
733 aa
AA seq
DB search
MSDFTMKKDADGVAIITWDCPGKTMNVLNGQAMIDLDGLVDDALADDAVKGIVITSGKKD
FAGGMDLNVLAKMKEDAGDEPARGLFEGIMKMHEGLRKIERAGMDPKTNKGGKPVAAALP
GTAVGIGLELPLSTHRIFAADNPKAKIGLPEIMVGIFPGAGGTTRLVRKMGAMAAAPFLL
EGKLVDPKKAKGAGIIDEVVEDPLAAARAWVLEAKDADIVKPWDAKGYKMPGGAPYHPAG
FMTFLGAAAMVHGKTFGAFPAAKALLSAVYEGALVPFDTALKIEARWFTHVLMNPSSEAM
IRSLFLNKEALEKGAVRPAGIEDQSVKKIGVLGAGMMGAGIALVSAQAGMEVVLIDRDQA
AADKGKAYTESYLDKGIKRGKVTADKKEAMLSRITATPDLDHLKGCDLIIEAVFEDPGVK
AEMTKKVEAIIPEDCIFASNTSTLPITDLAEASVRPEQFIGIHFFSPVEKMFLVEIIKGE
KTGDRAVAKALDYVRQIRKTPIVVNDARFFYCNRCIIPYVNEGARMITEGVAPALIDNAA
RQLGFPVGPIQLTDETSIDLGAKIARATKAAMGDAYPESAADDLIFWMEEQGRLGRKSNA
GFFDYDDKGKRQGYWKGMQEKYPLADEQPDLIEVQERLMFAQVLEAVRALEEGVLMDIRE
GDVGAILAWGFAPWSGGPLSWLDIIGTPYAAERCDQLTAKYGERFTCPPLLREMAEKGQT
FYGRFNPEASKAA
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttcacaatgaagaaagacgccgacggcgtcgccatcatcacctgggactgc
cccggaaaaaccatgaacgtgctgaacggccaggcgatgatcgaccttgatggtctggtc
gatgacgcgctggccgatgacgcggtcaagggcatcgtgatcacctctggcaagaaagac
tttgccggtggcatggatctgaacgtgctcgccaagatgaaagaggatgccggtgacgag
cccgcgcggggcctgttcgaaggcatcatgaaaatgcacgaaggtctgcgcaagatcgag
cgtgccggcatggatcccaagaccaacaagggtggcaaaccggtggcagcagccctgccc
ggcaccgctgttggcatcggtctggaactgccgctgtccacacatcgcatctttgccgca
gacaaccccaaggcaaaaatcggcctgccggagattatggttggcatcttccccggtgca
ggcggcaccacccgtctggtgcgcaagatgggcgccatggcggcggcccccttcctgctg
gaaggcaaactggtcgaccccaagaaagccaaaggtgctggcatcatcgacgaggttgtc
gaagacccgctggccgcagcccgcgcctgggttctggaggcaaaagacgccgatatcgtc
aagccctgggacgccaagggttacaaaatgcctggtggcgcgccctatcatcctgcgggc
ttcatgaccttccttggtgcggcagccatggtgcatggcaaaacatttggcgccttcccg
gcagccaaggcgctgctgagtgcggtctatgaaggcgcgctcgtgccattcgatacagcg
ctgaagattgaggcgcgctggttcacccatgtgttgatgaacccttcgtccgaggcaatg
atccgttcgctcttcctcaacaaggaagcgctggaaaaaggcgcagtgcgtcctgcgggt
attgaggatcagtcggtcaagaagatcggcgttctgggcgctggcatgatgggggccggt
atcgcgctggtctccgctcaggccgggatggaggttgttctgatcgaccgtgatcaggct
gccgccgacaagggcaaggcctataccgaaagctatctcgacaagggcatcaagcgcggc
aaagtcacggccgacaaaaaagaggcgatgctgtcacgcatcaccgcaacccctgatctg
gaccacctcaagggctgcgatctgatcattgaggcggtgttcgaagatccaggtgtcaaa
gccgagatgaccaagaaggtcgaggcgatcatccccgaggattgcatctttgcctccaac
acctcgaccctgccgatcacggatctggcagaggcctcggtgcgcccggagcagttcatc
ggcattcacttcttctcgccggtggaaaaaatgttcctggtggagatcatcaagggtgag
aaaaccggggatcgcgcggtggccaaggctctggattatgtgcgccagatccgcaagacc
ccgatcgtggtcaatgatgcgcggttcttttactgcaaccgctgcatcatcccctacgtg
aacgaaggcgcacgcatgatcaccgagggcgttgcccccgcgctgatcgacaatgccgcg
cgtcagctgggcttccctgtgggtccgatccaattgaccgatgagacctcgattgatctg
ggtgccaagatcgctcgtgccaccaaggcggcgatgggcgatgcttatcccgaaagcgct
gcggatgatctgatcttctggatggaagaacagggccgtctgggacgcaagtccaacgct
ggtttcttcgactatgacgacaagggcaagcgtcaggggtactggaagggcatgcaggaa
aaatatccgctggccgacgaacagcctgatctgattgaggtgcaggaacgcctgatgttc
gcacaggttctggaagccgtacgggcgctggaagaaggtgttctaatggacatccgcgaa
ggggacgttggcgccattctggcctggggctttgcgccctggtccggtggcccgctgagc
tggctcgacatcatcggcacgccctatgcggccgaacgttgtgatcagctgaccgcaaaa
tacggcgaacgcttcacctgcccgccgctgctgcgggagatggcggagaaaggccagacc
ttctacggtcgcttcaacccggaggccagcaaggctgcctga
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