Phaeobacter inhibens DSM 17395: PGA1_c12510
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Entry
PGA1_c12510 CDS
T02192
Name
(GenBank) transcriptional regulator, AraC family
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pga
Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pga03000
]
PGA1_c12510
Transcription factors [BR:
pga03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PGA1_c12510
BRITE hierarchy
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GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
HTH_23
HTH_28
HTH_20
HTH_11
Motif
Other DBs
NCBI-ProteinID:
AFO90968
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Position
complement(1299290..1300297)
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AA seq
335 aa
AA seq
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MIDDYFVQKGASANLTIPFDGEPQDFYFLLLPKATMLPIAAAVEPLRIANQVTNTQLYRW
YVMTPDGAPIQCSNGMAITPDLPMGPLPGDALAFVCSGVEPQNAASDAVLNWLRRERRFG
RSIGGICTGAFALAQAGLLGDHRFTLHWENQPGFVERYPDLLPSPRIFEISDTLMTCGGG
NAATDMMLNLIEDRHGKQLAIIVADMCLHVRTGGQSTPQKSNYAVAIGSRNQRLLNALQL
MQESIEEPLSIGELCDRLDISRRQLERLFARYLDQSPMHVYFDMRLSHAFALMNETSMSV
TEIALASGFNSSTHFSRQFKRKFGASPHFFRKGWN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatgactacttcgtgcaaaaaggggcttcggccaatctgaccatcccttttgac
ggtgagcctcaggatttctattttctgttgttgcccaaggcaacgatgttgcccattgcg
gctgccgttgaaccgctgcgcattgccaatcaggtcaccaacacgcagctctatcgctgg
tatgtaatgacgcccgacggcgcgccgatccaatgttccaacgggatggccatcacgccg
gacctgccaatgggaccgctgccgggggatgctctggcgtttgtctgctccggagtggaa
ccgcagaatgccgccagtgacgcggtgctgaactggttgcgacgcgaacgccgctttggc
cgttccatcggcgggatctgcaccggcgcctttgctctggcgcaggccgggttgctgggc
gatcatcgcttcaccctgcattgggagaaccagcccgggtttgtggaacgctatccggat
ctgttgccctcaccccggatctttgagatcagcgatacgctgatgacctgcggcggcggc
aatgcagccaccgatatgatgctgaacctgatcgaagaccgccacggcaagcagttggcg
atcatcgtcgccgacatgtgcctgcatgtgcgcaccggcggtcagagcacaccgcagaaa
tccaactatgctgtcgccatcggcagccggaaccaacgcctgctgaacgcgctgcaactg
atgcaggaatcgattgaagagccgctctccatcggtgagctgtgtgatcggttggacatt
tcgcgccgccagttggagcgactctttgcccgctatctcgaccagagcccgatgcatgtc
tatttcgacatgcgccttagccatgcgtttgcgctgatgaatgaaacatcaatgtccgtc
acggagatcgcgctggcgtccggtttcaacagttccacgcatttctcacgccaattcaaa
cgcaaatttggcgccagcccgcatttcttccgcaagggctggaactaa
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