Phaeobacter inhibens DSM 17395: PGA1_c12670
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Entry
PGA1_c12670 CDS
T02192
Name
(GenBank) conserved hypothetical protein, associated with transport
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga02010
ABC transporters
pga02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PGA1_c12670
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PGA1_c12670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pga02000
]
PGA1_c12670
Transporters [BR:
pga02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
PGA1_c12670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AFO90984
LinkDB
All DBs
Position
complement(1312229..1313575)
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AA seq
448 aa
AA seq
DB search
MSKTDVSRRGVLKTGAIAGAGVALPTIFTASSAAAFTNEPTGSTVTLGFNVPQTGPYADE
GADELRAYQLAVEHLNGGGDGGMMNTFSSKALQGNGIMGKEVKFVTGDTQTKSDAARASA
KSMIEKDGAVMITGGSSSGVAIAVQGLCQEAGVIFMAGLTHSNDTTGKDKKANGFRHFFN
GYMSGAALAPVLKNLYGTDRNAYHLTADYTWGWTQEESIAAATEALGWNTVNKVRTPLAA
TDFSSYIAPVLNSGADVLVLNHYGGNMVNSLTNAVQFGLREKVVNGKNFEIVVPLYSRLM
AKGAGANVKGIHGSTNWHWSLQDEGSQAFVRSFGSKYGFPPSQAAHTVYCQTLLYADAVE
RAGSFNPCAVVEALEGFEFDGLGNGKTLYRAEDHQCFKDVLVVRGKENPTSEFDLLEVVE
VTPAEQVTYAPDHPMFAGGALGTCNSGA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagactgacgtatcgcgtcgcggagtcctgaagaccggtgccatcgcgggcgcc
ggcgtggcgcttccgacgatctttaccgcatcgtctgcagccgcgtttacaaatgagcca
accggcagcaccgtgacgctgggcttcaacgtaccccaaaccggcccctacgcggatgag
ggcgcggatgagctgcgcgcctatcagctggcggtcgaacacctgaatggcggcggcgac
ggcggcatgatgaacaccttctcatccaaggccctgcagggcaacgggatcatgggcaag
gaagtcaaattcgtcactggcgacacgcagacaaaatcggacgcggcccgtgcatcggcc
aagtcaatgatcgaaaaagacggcgccgtgatgatcaccggcggctcgtcctccggtgtg
gcgattgctgtacagggcctctgccaagaggctggcgtgatcttcatggccggtctcacc
cactccaacgacaccaccggcaaagacaagaaggccaatggtttccgccatttcttcaac
ggctatatgtcgggtgcggctttggcaccggtgctgaagaacctctacggcacggaccgg
aacgcctatcacctgacggcggattacacctggggctggacacaggaagaatccatcgcc
gccgccaccgaggcgctgggatggaacaccgtgaacaaggtccgcacgccgctggcggca
accgacttctcgtcctacattgcgccggttctgaactccggcgccgacgtgctggtgctg
aaccactatggcggcaacatggtgaactcgctcaccaacgcagtacagttcggtctgcgt
gaaaaggttgtaaacggcaagaacttcgaaatcgttgttccgctttactcccgcctgatg
gccaagggtgccggtgccaacgtgaagggcattcacgggtccacgaactggcactggtcg
ctgcaggacgaaggctcgcaagcattcgtacgctccttcggctccaaatatggcttccca
ccgagccaggcggcacataccgtctattgccagaccctgctttatgcagatgccgtagaa
cgcgcgggctccttcaacccctgcgccgttgttgaggcccttgaagggtttgagttcgac
ggtttgggcaatggcaagacgctgtaccgtgccgaagaccaccagtgcttcaaagacgtg
ctggtcgtacgtggtaaggaaaacccgacctcggagttcgacctgcttgaagtcgtcgaa
gtaaccccggcggaacaagtgacctacgcgcccgatcatccgatgtttgctggcggtgcc
ctcggcacctgcaacagcggcgcctga
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