Phaeobacter inhibens DSM 17395: PGA1_c13290
Help
Entry
PGA1_c13290 CDS
T02192
Name
(GenBank) putative ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pga
Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pga03016
]
PGA1_c13290
Enzymes [BR:
pga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PGA1_c13290
Transfer RNA biogenesis [BR:
pga03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PGA1_c13290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AFO91044
LinkDB
All DBs
Position
1373686..1374843
Genome browser
AA seq
385 aa
AA seq
DB search
MKTLTSTEDLQAFCEAAAQHDYVTVDTEFLRERTYYSKLCLVQLAYPGAGDENAVLVDPL
ADGLSLEPLYDLFRNETVVKVFHAARQDLEIFWVDAQVFPKPLFDTQVAAMVCGFGEQVG
YETLVRKIVKQGLDKTSRFTDWSRRPLSDAQKTYALADVTHLRQIYEYLAAELKRTGRAR
WVEEELQVLTDPATYDVDPQEAWRRVKTRTNSGKFLAVVRELAAFRETYAKTNNVPRNRV
FKDDALVELASTKPKNASDLGNSRLLLREARKGAIAEGILQAVARGVDCPAGSQPQPDRS
REKLQVNPALADLLRVLLKAKTEASGVAAKLIAPSSDLDAIAAGQRNVPALKGWRLEVFG
ADALRLCNGEIALAAKGQDVKVVTL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactctgacctctaccgaagacctgcaggccttttgcgaagctgcggcgcagcat
gattatgtcacggtggataccgagtttctgcgagaacggacatattattccaagctatgc
ctggtgcagcttgcctatcccggggccggggatgagaacgcggttctggtggaccctctt
gccgacgggctgtcgctggaaccgctatatgatctgtttcgcaatgagaccgtggttaag
gtctttcatgccgcccgtcaggatctggagattttctgggttgatgcacaggtcttcccg
aaaccgctgtttgacacgcaggttgcggccatggtctgcggctttggtgagcaggtcggc
tatgaaaccttggtgcgcaaaatcgtcaaacaggggttggacaagacgtcacgcttcacc
gactggtcacgtcgcccgctgagcgacgcacagaaaacctatgcgctggcggacgtgacc
catctgcgccagatctatgaatatcttgccgctgagctgaagcgcaccggtcgcgcccgt
tgggtcgaggaagagctgcaggtgctgacggatccggcaacctatgatgtcgatcctcag
gaggcctggcggcgggtgaaaacccgcaccaactctggtaagtttctggccgttgtgcgc
gaattggcggcgttccgcgaaacctacgccaagaccaacaatgtgccacgcaaccgggtc
ttcaaggatgatgcgctggttgaactggcctcgaccaagcccaagaacgcttcggatctc
gggaattcgcggctgctgctacgcgaagcccgcaagggcgccatcgccgaagggatcctt
caggctgtggccaggggcgtggattgcccggcaggatcgcagccgcagccggatcgtagc
cgtgaaaagctgcaggtgaacccggcgctggccgatttgctgcgggtgctgttgaaggcc
aagacggaagcctccggcgtcgccgcgaagctgattgcgcccagttcggatctggacgcg
attgccgcgggtcagcggaatgttcccgcgctcaaaggctggcgtcttgaggtcttcggc
gccgatgcgctgcgtctgtgcaatggtgagatcgctctggcggcaaagggacaggacgtg
aaggttgtcacgctctga
DBGET
integrated database retrieval system
