Phaeobacter inhibens DSM 17395: PGA1_c13710
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Entry
PGA1_c13710 CDS
T02192
Name
(GenBank) diaminopimelate decarboxylase-like protein
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00300
Lysine biosynthesis
pga00470
D-Amino acid metabolism
pga01100
Metabolic pathways
pga01110
Biosynthesis of secondary metabolites
pga01120
Microbial metabolism in diverse environments
pga01230
Biosynthesis of amino acids
Module
pga_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PGA1_c13710
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PGA1_c13710
Enzymes [BR:
pga01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PGA1_c13710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Acyl-CoA_dh_M
Orn_DAP_Arg_deC
Acyl-CoA_dh_1
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AFO91085
LinkDB
All DBs
Position
1414185..1416671
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AA seq
828 aa
AA seq
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MTDLFPDTDLRLIDEIATTAGTPFYLYDASVLRRRLDALRAALPQVDFFYSLKSNPNLSV
TRVLHGHGAGCEVSSLLELETSLQAGATPERILMVGPGKSETELTRAIELGIKAIVVESA
YELTQIDALARQQGRVQNIALRVNPDFHAGGAKLNMSGRPTQFGIDQSELPDVLKQAEGC
AQLRLCGLHAYMGTRILTHETVVANVGNILNLATEVVSSLKVPLDFVDVGGGFGIPYYDG
ETELDLDALGQAVTPLVQSFGTTHPKTRVVIELGRYLSGPSGQFVTRVQQTKSSKGEHFA
VCDGGSNVHVAAAGQGFLRKNFPIRLLRDGKAEIDDEAAQPWTLTGPLCTPQDVIGKSVL
MATPQVGDLISIGQSGAYGPTASPVNFLGFGAPAEVMIDGTELRLVRSRDTVEARLAGQQ
PSDLRLADHKNSSTGHAPAALADLYSSAPGNGLEGTPFSDPCLERLTGLQTLFRETGARL
DRDPESWTALWENPTVRALTTIGVPEKFNGFPLRDSGLGISDCPYGLHVAMVERLARFDA
NCILSLPGPSLSGGAVLATGTDAQIARFFDGYRFGPQGTFFAVTEPDAGSDASNGRSTLG
LKDGKLVLNGVKTLVGGIARADIGLFFAHIEETGRMGLVMIAPSDAPDCVKIERLGTNGL
RGADLCQMTLTDFPVTQDMILGSGGRSLRDGFMAINGVFERNRPMVAAMALGSGRGLIEL
MLEDPTRLPAYQDLLASHTALLVQLVKVIHAQENRRPKVQDISKVKMQAVSFVDQVVRRI
TDQDPMRFLQDAELRRRCRDVKAFEYMEGTSNIHLLNAYRSYTAGVDQ
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgactgatttgttcccagacaccgacctgcgcctgatcgacgagattgcgacaaccgcg
gggacgccgttctacctatatgatgcctcggtgctgcggaggcgattggatgcgctgcgc
gcagcccttccgcaggtagattttttctattcgctcaagtccaacccgaacctttcggtg
acgcgggtgttgcatggccatggggctggctgcgaagtgtcctcgctgctggagttggaa
acgagcctgcaggccggtgccacgcctgaacgcatcttgatggtgggccccggcaaatcc
gagacagagctgacgcgcgccattgaattggggatcaaggcgatcgtggtcgagtccgcc
tacgagctgactcaaattgatgccttggcgcgccagcagggccgcgtccagaatatcgcg
ctgagggtcaacccagacttccacgcaggcggtgcgaagttgaacatgagcggtcgccca
acccaatttggcatcgaccaatccgaactgcccgatgtgctgaagcaggcagagggctgc
gcgcaactgcggctgtgtggtctgcatgcctatatgggcacacgtatcctgacccatgaa
actgttgtcgccaatgtgggcaacattctcaacctggcgaccgaggtcgtatcaagcctc
aaggtccccctcgattttgtcgacgttggtggtggatttggtattccctattacgacggc
gagacagagctggatctggacgctcttggtcaggcggtcacgccacttgtccagagcttt
ggcaccacacatccaaagacccgtgttgtgatagaactggggcgctatctctctggtccg
tctgggcagtttgtgacccgtgtacagcagaccaagagcagcaagggcgagcattttgcc
gtctgcgatggtggctccaacgtccatgtcgctgcggctggtcagggctttctgcgcaag
aatttcccaatccgcttgttgcgggacggcaaggcagagatcgacgacgaggcggcgcag
ccctggaccctgaccggcccgttgtgcacgccgcaggacgtgatcggtaaatctgtcctg
atggcaacaccgcaggtgggcgacctgatttccatcgggcaatccggcgcttatggacca
acggcgtcaccggtcaatttcctcggcttcggcgccccagcagaagtcatgatcgacggc
acagagctgcggctcgttcggtcccgcgacacggtagaggcgcgcctggcagggcagcag
ccatctgacctgcggttggccgaccacaaaaattccagcaccggccacgctcccgcggcg
ctggccgatctttattcctcggcacccggaaatgggctggagggaacaccgttttcagat
ccctgccttgagcgtctgaccggattgcagacgctatttcgcgaaaccggtgcccgtctg
gaccgcgaccccgaaagctggaccgcactgtgggagaacccaacagtgcgtgcgctgacc
accatcggtgtgcctgagaaattcaacggcttcccattgcgcgacagtggccttggcatt
tcagattgcccctatggtctgcatgtcgccatggtcgaacgtctggcacggtttgacgcc
aactgcatattgtcgctaccggggccatcgctgtccggtggcgcggtgctggcaacaggc
accgacgcacagattgcgcggttctttgacggataccgctttggcccgcaggggacattc
tttgcggtgacagaaccggatgctgggtccgatgcctctaacgggcgcagtacgctgggc
ctgaaagacggaaaactggtccttaatggtgtcaaaacattggttggcggcattgcccgc
gccgatattggcctgttcttcgcgcatatcgaggaaaccggtcgcatggggctggtgatg
attgcaccatctgatgcgcccgactgcgtgaaaatcgaacggcttggcaccaatggtctg
cgcggggcggatctctgccagatgaccttgaccgacttcccggtgacgcaggacatgatc
cttggcagcggaggacgatcgctgcgggatggctttatggccatcaacggtgtctttgaa
cgcaaccgccccatggttgccgcgatggcgctgggatcagggcgcggccttattgagttg
atgttggaagatccgacacggctcccggcgtatcaggacctgttggccagccacactgcg
ctgctggtgcaactggttaaggtgatccacgcgcaggaaaaccgccgccccaaggttcag
gatatcagcaaggtcaaaatgcaggccgtgagctttgtcgatcaggtggtgcgccggatc
acggaccaggacccgatgcgctttttgcaggatgccgaactgcggcggcgatgccgggac
gtgaaggcctttgaatatatggagggcaccagcaatatccatcttttgaacgcctaccgg
tcttataccgcaggggtggatcaatga
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