Phaeobacter inhibens DSM 17395: PGA1_c13910
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Entry
PGA1_c13910 CDS
T02192
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase PhrB
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pga
Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pga03400
]
PGA1_c13910 (phrB)
Enzymes [BR:
pga01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PGA1_c13910 (phrB)
DNA repair and recombination proteins [BR:
pga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PGA1_c13910 (phrB)
Prokaryotic type
PGA1_c13910 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFO91105
LinkDB
All DBs
Position
1438556..1439995
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AA seq
479 aa
AA seq
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MTDEKPSNAPIIWWVRRDLRLADNPALAAAVAAGVPVIPVFIFETLDEDLGAAPRFRLGL
GLAHLAKELEQRGARLILRRGPAQEVLTQLITETGAGAVHWTRAYDPQAIARDTGIKEQL
KGQGIAAKSFGGHLLFEPWTVETKTGGMYRVYSPYWKSVRDRDVDGLIAAPSRIPAPAHW
PTSDDLDSWQMAAAMRRGADVVAQYCRVGEDAAQERLAEFLDTRVADYKQDRDFPAVDAT
SGLSENLAWGEISPRRMWHHGLEARRAGKSGAEHFLKEIVWREFAYHLMFHTPHILTRNW
RPEWEHFNWSERDDDKVDAWRRGQTGYNFVDAAMRELYVTGKMHNRARMIVASFLTKHML
THWRIGQQWFEECLVDWDPASNAMGWQWVAGSGPDASPFFRIFNPDGQLEKFDPKGRYQS
AWIAEGQANPPQTALDFYRATPLSWELSPQDTRAEPFLDLKEGRARALEAYGQRELPDD
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgagaaaccgagcaacgccccgatcatctggtgggtgcggcgcgacctgcgt
cttgccgataaccctgcgctggcggcggctgttgctgccggtgttccggttatcccagtc
tttatctttgagacgctggacgaggatctgggggccgcgccacggttccggctggggctg
gggcttgcgcatctggccaaggaattggagcagcgcggtgcaaggctgatcctgcgccgg
ggccccgcgcaggaggtgcttacgcagctgatcactgaaactggtgcgggcgcggtccac
tggacacgtgcctacgacccgcaggctatcgcccgcgatacgggcatcaaggaacagctg
aagggacaggggattgcggccaaatcctttggcggccatctgctgtttgaaccctggacg
gttgagaccaagactggcggcatgtaccgggtctattcgccctactggaaatctgtgcgc
gaccgcgatgtcgacgggctgatcgccgccccatcacgaatcccggcgcccgcgcactgg
ccgacctcagatgatctcgacagctggcagatggctgccgccatgcgccgtggcgcagat
gtggtggcgcaatactgccgcgttggggaagatgccgcgcaggagcggctggcagagttc
ctcgacacccgcgtcgccgactacaaacaggatcgcgactttccggctgtggatgccacc
tcgggcctgtctgagaacctcgcttggggggagatcagcccgcgccgcatgtggcaccac
ggattggaagcgcgccgggccggtaaatccggcgctgaacatttcctcaaggagatcgtc
tggcgcgaatttgcctatcacctgatgttccacaccccccatattctgacccgcaactgg
cgtccggaatgggagcatttcaactggtccgagcgtgacgatgacaaggtcgacgcctgg
cggcgcggccagacagggtataatttcgtcgatgccgccatgcgagagctttacgtgacc
ggcaagatgcacaaccgcgcccggatgatcgtcgccagctttctgaccaaacatatgctc
acccattggcgcatcggccagcagtggtttgaggaatgtctggtggactgggatccggcc
tccaacgccatgggctggcagtgggtggccgggtccggccccgatgcctcgccgttcttt
cggattttcaaccccgatgggcagctggagaaattcgaccccaagggccgctaccaatct
gcctggatcgccgaaggtcaggccaatccgccgcaaactgcgctggatttctaccgcgcc
acccccctgtcctgggagctgtcgcctcaggacacacgcgctgagccgttccttgatctg
aaggagggacgcgcccgcgcgctggaggcttacggacagcgggaactgcccgacgactga
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