Phaeobacter inhibens DSM 17395: PGA1_c14180
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Entry
PGA1_c14180 CDS
T02192
Name
(GenBank) putative transport system, extracellular solute binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PGA1_c14180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pga02000
]
PGA1_c14180
Transporters [BR:
pga02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PGA1_c14180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
YqhI
Motif
Other DBs
NCBI-ProteinID:
AFO91131
LinkDB
All DBs
Position
complement(1471873..1473537)
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AA seq
554 aa
AA seq
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MTKDTITGTNLHPAAKMYATETLAGKMDRREFMTRATALGVSSVAAYGLLGLDAPVQAAS
HKQDGGTMRMQMLVKPLKDPRTYDWSEMGNQSRGTLEYLVEYNNDGSLSGMLLDSWEINE
DATVYTLNVRKGVKWNNGDDFTAEDVARNIAGWCDKGMEGNSMAGRFGSLVDEASGQARD
GAIEVVDSHTVRLSLPNSDISLIPGMADYPAAIVHSSFQTDDFTANVGTGPYKLAELEVG
VKATLERNEDHTWWGEAVFGRPALDRIEYIDFGTDSSSWLAALESEEVDLLYESVGEFID
VMDGLGFQKSEVVTMATIVVRPNQLATVDGKQPYADKRVRQAISMAVDNSVCLELGYGGR
GQPAENHHVGPIHPEYAELPARKVDAAAAKALMEEAGMMDFEHEIISIDDDWRKNTTDAV
AAQLRDAGFKVKRTVLPGSTFWNDWVKYPFSSTNWNHRPLGVQIHALAYRSGEAWNEFGW
SNAEFDGLLTEALAIADADKRREVMAKMEAIIQDEGVTIQPYWRSLYRHMREGVVGADMH
ISYEHHHYKWGWSA
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagacaccatcaccgggaccaatctgcacccggcggcaaagatgtatgcgaca
gaaacccttgctgggaagatggaccgacgcgaattcatgacccgcgccactgcgcttggc
gtcagctcggtggcggcatacggcctccttgggctcgacgcgccggttcaggccgcaagt
cacaaacaggatggcggcaccatgcgcatgcagatgctggtgaagccactgaaagatccg
cgcacctatgactggtccgaaatgggcaaccagagccgcggcacactggagtatctggtc
gaatacaacaacgatggctccctatctggcatgttgctggacagctgggagatcaatgaa
gacgctaccgtttacactctcaacgtccgcaagggcgtgaaatggaacaatggcgatgat
ttcaccgccgaggatgtggcccgcaatatcgccggctggtgtgacaagggcatggaaggc
aactccatggccggccgtttcggctcactggttgacgaagcctccgggcaggcccgtgac
ggcgccatcgaagtggtggacagccacacggtccgcctcagcctgccgaactccgatatt
tcgctgatccccggcatggccgactatcccgccgccattgtccactccagcttccagacc
gatgatttcacggccaatgttggcaccggcccctacaagctggcggagcttgaggtcggc
gtgaaggccacgctggagcgcaacgaagatcacacatggtggggcgaagccgtctttggc
cgtccggcactggaccgcatcgaatatatcgactttggcactgactcctcctcatggctg
gcagcactggaatccgaagaggtggatctgctctacgaatccgtgggggaattcatcgac
gtgatggacgggctgggcttccagaagtctgaagttgtcaccatggctaccatcgttgtt
cgccccaaccagctggccaccgtcgacggcaaacagccttatgctgacaaacgcgtgcgt
caggcgatctccatggctgtcgacaattccgtctgcctggaactggggtatggaggtcgc
ggccagcctgcggaaaaccatcacgttggtccgatccatcccgaatacgccgaactgccc
gcccgcaaggtcgatgctgccgcggcgaaggcgctgatggaagaagctggtatgatggat
ttcgagcatgaaatcatctccattgacgatgactggcgcaagaacaccaccgatgcggtc
gcagcgcagctgcgcgatgccggcttcaaggtcaaacgcacagtgctgcccggctccacc
ttctggaacgactgggtgaaatacccgttcagctccaccaactggaaccaccgtccgctg
ggcgtgcagatccacgcgctggcctatcgctccggcgaggcctggaatgaattcggctgg
tccaatgcggaattcgacgggctgctgaccgaggcgctggccattgcggatgctgacaag
cgccgtgaagtcatggccaagatggaagcgatcatccaggatgagggggtgaccatccag
ccttactggcgctcgctctaccgtcatatgcgtgaaggcgtcgttggcgcagatatgcac
atttcctatgagcatcatcactacaaatggggctggtcggcctga
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