Phaeobacter inhibens DSM 17395: PGA1_c15010
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Entry
PGA1_c15010 CDS
T02192
Name
(GenBank) putative extracellular solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PGA1_c15010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pga02000
]
PGA1_c15010
Transporters [BR:
pga02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PGA1_c15010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AFO91212
LinkDB
All DBs
Position
complement(1559273..1561099)
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AA seq
608 aa
AA seq
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MRPDFFFRVRPALAGIILSASVNFAQAESAHGIAMYGDPALPPDFVSLPYANAEAPKGGK
VVFGNTGGFDTLNPFAPKGTPPWQMRFWGYESLMGRSADEAFTLYGLLAESIEVPDDRAW
VEFTLRPEARFSDGSPVTVADVIWSYETLGQEGHIRYRRFWNQIDSIEQTGERSLRITFN
EDNRELALIAGLRPILKKGQWDGKDFAASGLDEAPIGSGPYTVAAFEPGRFIRFSRNPDY
WGRDLPLRRGTNNFDEIRLDFYGDQTVLLEAFKAGEISAIREFNAAKWDKAYDFPAIAIG
DVVKTVIPNGKPSGMTGIAMNTRRAPFDDWRVREALIRAFNFEYMNETLTGGTQPRILSY
FSNSYLALQPGPAEGKVRALLAPFEESLLPGVLEGYSLPVSDGTERNRKNLRAATKLLAE
AGWTVQDGVMRNAEGEALELQVLLTPGNLGEGEMRSVVEIYARALERLGISLSSDIVDSA
QFVQRQQAFDYDMTFFRRAMSLSPGNEQYLYWGSTAAQQKGSRNLIGIEDPAVDAMIDAM
LVSTSKEDFTAAARALDRLLTAGRYVIPVWQYAEGRIAHVKELKFPDRRPVSGDGITYMP
EVWWYQAD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtccagattttttctttagagttcgaccggccttggccggaatcatcctcagcgca
agcgttaattttgcacaagcagaatcagcgcatggcatagctatgtatggggacccggcc
ctaccaccggattttgtgtctttaccctatgcaaacgccgaggcgcccaagggtggcaag
gtggtcttcggcaacaccggtggctttgatacgctgaacccttttgccccaaaaggcacg
ccgccctggcagatgcgcttctggggatatgagagcctgatggggcgttctgcggacgag
gcattcacgctctatgggctgctcgccgaatcgattgaggtgccggatgatcgcgcatgg
gttgaatttacgctacgtccggaggcccgattctccgatggttcaccagtcacggtcgca
gatgtcatctggtcctatgaaaccctcggacaggaggggcatatccgctatcggcggttc
tggaaccagatcgacagcatcgaacaaacgggcgagcgcagcctgcgcataacctttaat
gaggacaaccgtgaactggcgctcatcgcgggcctgcgtccgatcctgaaaaagggacag
tgggacggcaaggattttgccgcctccggcctggatgaagccccaatcggctccggacct
tataccgttgctgcattcgaacccggccgattcatccgtttttcccgcaatcccgactac
tgggggcgcgatctgcccttgcgacgcggcaccaataacttcgatgagatccggctggat
ttttatggcgaccaaaccgtattgctggaagccttcaaagcgggcgagatttctgcgatc
cgggagttcaacgccgcaaaatgggacaaggcgtatgattttccggcgatcgccattggc
gacgtcgtcaagaccgtcatccccaatggcaaaccctccggcatgacgggcatcgcaatg
aacacccgccgcgcgcccttcgacgactggcgcgtgcgcgaagcgctgatccgggccttc
aacttcgaatatatgaacgagacgctgacaggcggaacccagccgcgcattttgtcttat
ttttccaattcctatctggccctgcaacccggccccgccgagggcaaggtgcgcgcgctc
ctggccccatttgaggaaagcctgctccccggtgtgctggaaggctatagcctgcctgtt
agcgatggcactgagcgcaatcgcaagaacctgcgcgcggcgacaaaacttctcgcggag
gcaggctggaccgttcaggacggcgttatgcgcaatgccgagggtgaggcgctggagttg
caggttctgctgacccccggcaatctcggcgaaggcgaaatgcgctccgttgtggaaatc
tacgcccgcgctttggaacgtcttggcatctctctgtcatctgacattgtcgacagcgcc
cagtttgtgcagcgccagcaggcgtttgactatgacatgaccttcttccgccgggcgatg
tcactgagtcccggtaacgaacaatatctctattggggcagtactgcggcgcaacagaaa
gggtcgcgcaatctgatcgggattgaggacccggcggtagatgccatgatcgacgcgatg
ctggtctcaaccagcaaggaggatttcaccgctgccgcccgcgcattggatcgcctgttg
acggccggtcgctatgtgatcccggtctggcaatatgccgaggggcgcatcgctcatgtg
aaggagctgaagttcccggaccggcgaccggtcagcggcgatgggatcacctacatgccc
gaggtctggtggtatcaggccgactga
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