Phaeobacter inhibens DSM 17395: PGA1_c16430
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Entry
PGA1_c16430 CDS
T02192
Name
(GenBank) putative DNA repair protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PGA1_c16430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pga03400
]
PGA1_c16430
Enzymes [BR:
pga01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PGA1_c16430
DNA repair and recombination proteins [BR:
pga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PGA1_c16430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AF1548-like_C
Motif
Other DBs
NCBI-ProteinID:
AFO91347
LinkDB
All DBs
Position
complement(1703535..1704203)
Genome browser
AA seq
222 aa
AA seq
DB search
MTGSKNPDAAGAVNVGRIITSDACVSEGAAWLADHDARFAAAIDLCGPLPLRRKPEGFAE
LLSAIVSQQVSVASANAIWGRMVEAGLDTATAVAAASEDDLRGVGLSRQKIRYAHALAAA
GIDFDALRQLPDSEVIETLTQVSGIGTWTAEIYAMFSLGRADVFAHGDLALQEGARILLD
LPERPKPAAMRRIAEAWSPWRSVAARALWAYYRVAKDREGIR
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgacaggatcgaaaaatccggatgcggcgggggcggttaacgtcggacggatcatcacc
agtgacgcctgcgtatctgaaggagcagcttggctggccgatcacgacgcgcgatttgcc
gccgcgattgacctctgcggaccgctgcccctgcgccgcaaacccgagggctttgccgaa
ctgctcagcgcgattgtcagccagcaggtgagcgtcgcctctgccaatgcgatctggggc
cggatggttgaggcggggttggacaccgccactgccgttgccgccgctagcgaggatgat
ctgcgcggtgtcggtctcagccgtcagaaaatccgctacgcccacgccctggctgcggcc
ggcattgatttcgacgccctacgccagctgccggattccgaggtgattgagaccctgacg
caagtttcgggcatcggcacttggaccgcggaaatctatgcgatgttctcgcttgggcgg
gccgatgtctttgcccatggtgatctggcgttgcaggagggtgcgcggatactgctcgac
ctgccagagcggcccaaacccgccgcgatgcgccgcatcgccgaggcatggtcgccgtgg
cggtcggttgcggcgcgcgcgctctgggcctattaccgggtggcaaaggacagggaaggg
atccgatga
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