Phaeobacter inhibens DSM 17395: PGA1_c16900
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Entry
PGA1_c16900 CDS
T02192
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase Ung
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PGA1_c16900 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pga03400
]
PGA1_c16900 (ung)
Enzymes [BR:
pga01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PGA1_c16900 (ung)
DNA repair and recombination proteins [BR:
pga03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PGA1_c16900 (ung)
Prokaryotic type
PGA1_c16900 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFO91391
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All DBs
Position
1764661..1765314
Genome browser
AA seq
217 aa
AA seq
DB search
MTPDLSDLGGWSTLPFFAERYPAIAEAVAEDPRDILPPADQRLAALSLTPSEATRVVILG
QDPYPTPGHAHGLAFSVAPDVRPLPRSLNNIFKELHDDLGVERQTGDLRGWARQGVLLLN
TVLSVPAGDANGHKNLGWQQLAHEVLSLTSQRPTAYILWGKQAQGLEKYIQPGDHLILRT
AHPSPLSARRGFFGSRPFSTVNRWLAEQGQPTIDWNA
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggacctgtcggatcttggcggctggtccacgctgccgtttttcgcagaacgc
tacccggccattgctgaggccgtggccgaggatccgcgcgacattcttccgccagcggat
cagcgccttgccgccctctctctgaccccgtcagaggcaacccgcgtggttattctgggt
caggacccctatccaacaccgggtcatgcccatggcctggcgttttcagtggcacctgat
gtgcgcccgctgccgcgttctttgaataacattttcaaagagttgcacgatgatcttggt
gtcgaacgccaaacaggcgacctgcgcggctgggcgcgtcagggggttctgctgctcaat
accgtgttgtcagttcccgcaggcgatgccaacggccacaaaaaccttggctggcagcag
ctggcgcatgaggtcctcagcctgaccagtcagcgcccgacggcctatattctctggggg
aaacaggcccaagggcttgaaaaatatatccaaccgggtgatcaccttatcctgaggacc
gcgcacccctcaccactgtctgcgcgtcgcggcttttttggctcgcgccccttttcgacg
gtgaaccgctggcttgctgagcagggtcagccaacaattgactggaacgcgtga
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