Phaeobacter inhibens DSM 17395: PGA1_c23190
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Entry
PGA1_c23190 CDS
T02192
Symbol
lpdA3
Name
(GenBank) dihydrolipoyl dehydrogenase LpdA
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00010
Glycolysis / Gluconeogenesis
pga00020
Citrate cycle (TCA cycle)
pga00260
Glycine, serine and threonine metabolism
pga00280
Valine, leucine and isoleucine degradation
pga00310
Lysine degradation
pga00380
Tryptophan metabolism
pga00620
Pyruvate metabolism
pga00630
Glyoxylate and dicarboxylate metabolism
pga00640
Propanoate metabolism
pga00670
One carbon pool by folate
pga00785
Lipoic acid metabolism
pga01100
Metabolic pathways
pga01110
Biosynthesis of secondary metabolites
pga01120
Microbial metabolism in diverse environments
pga01200
Carbon metabolism
pga01210
2-Oxocarboxylic acid metabolism
pga01240
Biosynthesis of cofactors
Module
pga_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pga_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pga_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
pga_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PGA1_c23190 (lpdA3)
00020 Citrate cycle (TCA cycle)
PGA1_c23190 (lpdA3)
00620 Pyruvate metabolism
PGA1_c23190 (lpdA3)
00630 Glyoxylate and dicarboxylate metabolism
PGA1_c23190 (lpdA3)
00640 Propanoate metabolism
PGA1_c23190 (lpdA3)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PGA1_c23190 (lpdA3)
00280 Valine, leucine and isoleucine degradation
PGA1_c23190 (lpdA3)
00310 Lysine degradation
PGA1_c23190 (lpdA3)
00380 Tryptophan metabolism
PGA1_c23190 (lpdA3)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PGA1_c23190 (lpdA3)
00670 One carbon pool by folate
PGA1_c23190 (lpdA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pga04147
]
PGA1_c23190 (lpdA3)
Enzymes [BR:
pga01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PGA1_c23190 (lpdA3)
Exosome [BR:
pga04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PGA1_c23190 (lpdA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
NAD_binding_8
GIDA
HI0933_like
Pyr_redox_3
XdhC_C
AlaDh_PNT_C
DAO
FAD_binding_2
2-Hacid_dh_C
UDPG_MGDP_dh_N
Thi4
3HCDH_N
Amino_oxidase
Motif
Other DBs
NCBI-ProteinID:
AFO92003
LinkDB
All DBs
Position
2404809..2406188
Genome browser
AA seq
459 aa
AA seq
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MSDNHADLIVLGAGPGGYACAFRAADLGRSVIIVDPRATLGGVCLNVGCIPSKALLHAAE
MIRETRHGGGWGILTGNVSVDLNKLRAKKDSIVEQLTTGLVGLAKRRKVQTIRGSAQFTS
DKSLEIDGESWTFDQAVIAVGSAPVRLPGWPEDDRIWDSTDALELREIPKRLSIVGGGII
GLEMATVYAALGSKVTVIEFMDQIAPGADADAVTILRAALETEDVTIHTGTKVTEVKASK
TALTLTCEGGFEGTIKADAAIQAVGRRSNGSLVDPAAAGVEADDRGIIPVDASCRTNVAT
VFAIGDVTGNPMLAHRATHQGHVAAEVASGHATALDTDLIPSVAYTAPELAWAGLTQAKA
TERGIPHRVANFPWAASGRNLSSGGGEGLTKLVYCPDSHRLLGATIVGRNAGELLAECVL
AMEMGATLEDMSLAVHAHPTLSETVGFAAERALGTLTDL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaccacgccgatctcatcgttctgggcgcaggcccgggtggctatgcctgt
gcctttcgcgccgccgatctggggcgcagtgtaatcatcgtcgacccacgcgcgacactt
ggtggcgtctgcctgaatgttggctgcatcccttccaaagccctcttgcatgccgccgag
atgatccgcgagacccgacacggcggaggctggggcatcttgaccggcaacgtctctgtc
gatctgaacaagttgcgcgcgaagaaggacagcatcgttgaacaattgaccactggcctc
gtcggccttgcgaagcgacgcaaagtccagaccattcgaggctcggcgcagttcacaagc
gacaagagccttgagattgatggcgagtcatggaccttcgatcaagccgtgattgctgtg
ggctcagcgcctgtgcgcctgcccggctggcccgaggatgatcgtatctgggactccacc
gatgcacttgaactgcgtgagattcccaaacggctttcgatcgtgggcggcggcatcatc
gggttggaaatggcgacggtctatgcggcgcttggcagcaaggtgactgtcatcgagttc
atggatcagatcgcccccggcgcggatgccgacgcagtcacgatcctgcgtgccgcgctc
gaaacggaagatgtcacgattcacacaggcaccaaagtgaccgaggtgaaggcctcaaaa
accgccctgacgctcacctgtgaaggcgggtttgagggcaccatcaaggcggatgcggca
attcaggcggtgggccgtcgctcaaacgggagcctcgttgatccggccgctgcgggagtc
gaggctgacgaccgaggcatcatcccagtggatgcgtcctgccgcaccaacgttgcgacc
gttttcgccattggcgacgtcaccggcaacccgatgctggcacaccgcgcgacccaccaa
ggccatgtggcggccgaagtcgcctcgggccatgccaccgctctggataccgatctcata
ccgtcggtcgcctacacggcacctgaattggcctgggccggccttacacaggccaaagcc
acggaacgcggtatcccgcacagagttgccaattttccctgggccgcgagcgggcgcaac
ctttcatcgggcggtggggaagggttgaccaaactggtctattgccccgactcccatcgc
ctgctgggcgcgaccattgtgggacgaaatgccggagagcttttggcagaatgtgtgctg
gcaatggaaatgggtgcaacactcgaagatatgtcactcgcggtccatgcacacccgaca
ctttccgaaaccgttggctttgccgcagaacgcgccctgggcacgctaaccgatttgtaa
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