Phaeobacter inhibens DSM 17395: PGA1_c24370
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Entry
PGA1_c24370 CDS
T02192
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pga
Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pga03009
]
PGA1_c24370 (rimO)
Enzymes [BR:
pga01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PGA1_c24370 (rimO)
Ribosome biogenesis [BR:
pga03009
]
Prokaryotic type
ribosomal protein modification factors
PGA1_c24370 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
DUF6802
TRAM
CLP1_P
Thioredoxin_6
Motif
Other DBs
NCBI-ProteinID:
AFO92122
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All DBs
Position
2543603..2545024
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AA seq
473 aa
AA seq
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MTQTPGSTNPPSLRPDLAPKPQLGDAPRDGQPTLGMVSLGCPKALVDSERILTRLRAEGY
GVSPDYSGADAVIVNTCGFLDSAKAESLEAIGEALKENGKVIVTGCLGAEPDYIRAHHPR
ILAVTGPHQYEQVLDAVHAAVPPSPNPYVDLLPAAGVKLTPRHFSYLKISEGCNHKCKFC
IIPDMRGKLASRPAHAVLREAEKLVDAGVRELLVISQDTSAYGLDRKYDVNPWKDGEVRS
HIQDLSRELGRLAPADELWVRLHYVYPYPHVRELIPLMADPDNALLPYLDIPFQHAHPDV
LRRMARPAAAAKTLDEINAWRATCPDITLRSTFIVGYPGETEAEFQHLLDWMDEAQLDRV
GCFKYENVDGARSNNLADHVPEEVKQDRWDRFMEKAQAISEAKLAAKVGQTMQVIVDDID
EDGIATCRTKADAPEIDGNLFIDEDTDGLQVGELVTVEVDEAGEYDLWGVRAG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacacagacacccggttccaccaatccgcccagccttcgccccgatcttgcgcccaag
ccccagcttggcgatgcgccccgtgacgggcagccgacccttggcatggtgtcactgggc
tgccccaaagcgctggtcgatagcgagcggatcctgacgcggctgcgcgccgagggctat
ggcgtgtcgccggattactccggggccgatgcggtgatcgtgaacacctgcggctttctc
gacagtgccaaggccgagagcctggaagccattggcgaggcgctgaaggaaaacggcaag
gtgattgtcacgggctgtctgggtgcagaaccggactatatccgcgcgcatcatccgcgt
attctggcggtgaccggcccgcaccagtatgaacaggtgctggatgcggtgcacgccgcc
gtgccgccctcgcccaacccttacgtggatttgctacctgctgcgggcgtcaagctgacg
ccgcgccacttcagctatctgaagatttccgagggctgcaaccacaagtgcaaattctgc
atcatccccgacatgcgcggcaaactggcctcccgtcccgcccatgcggttctgcgtgag
gcggaaaaactggtggatgccggcgtgcgcgagctgttggtgatctcgcaggatacctct
gcctatgggctggatcgcaaatatgacgtgaacccgtggaaagatggtgaggtccgcagc
catattcaggatctgagccgtgagctgggccgactggcccccgcggatgagctgtgggtg
cggttgcactatgtctacccctacccgcatgtgcgcgaactgatcccgttgatggcggac
ccggacaatgcgctgctgccctatctggacatcccgttccagcacgcccacccggatgtg
ctgcgccgcatggcccggcctgccgcagcggccaagacgctggatgaaatcaacgcctgg
cgcgcgacctgcccggatatcaccctgcgctccaccttcatcgtcggctaccccggcgag
acggaggcggagttccagcatctgctcgactggatggacgaggcgcagctggatcgtgtg
ggctgtttcaaatatgagaacgtcgatggtgcacggtccaacaatctggccgatcacgta
ccggaagaggtgaaacaggaccgctgggaccgcttcatggagaaggcgcaggcgatttcc
gaagccaagctggcggccaaggtcggccagacgatgcaggtgatcgtggacgacatcgac
gaagacggcatcgccacctgccgcaccaaggccgacgcaccggagatcgacggcaacctg
tttattgatgaggacactgatgggttgcaggtcggcgagttggtcaccgttgaagttgat
gaggcgggggagtatgatctgtggggcgtcagggctggctaa
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