Phaeobacter inhibens DSM 17395: PGA1_c24560
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Entry
PGA1_c24560 CDS
T02192
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00220
Arginine biosynthesis
pga00240
Pyrimidine metabolism
pga00250
Alanine, aspartate and glutamate metabolism
pga01100
Metabolic pathways
pga01110
Biosynthesis of secondary metabolites
pga01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
PGA1_c24560 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
PGA1_c24560 (carB)
00220 Arginine biosynthesis
PGA1_c24560 (carB)
Enzymes [BR:
pga01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
PGA1_c24560 (carB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D1
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
ATP-grasp_4
Dala_Dala_lig_C
ATPgrasp_Ter
CoA_binding_2
ATP-grasp_5
RimK
Motif
Other DBs
NCBI-ProteinID:
AFO92141
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All DBs
Position
2559650..2563009
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AA seq
1119 aa
AA seq
DB search
MPKRTDIQSIMIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPGL
ADATYIEPITPEVVAKIIEKERPDALLPTMGGQTGLNTALALEEMGVLAKFDVEMIGAKR
EAIEMAEDRKLFREAMDRLGLENPRATIITAPKKDNGNADLDAGVQMALDELEDIGLPAI
IRPAFTLGGTGGGVAYNREDYIHFCRSGMDASPVNQILVDESLLGWKEYEMEVVRDTADN
AIIVCSIENIDPMGVHTGDSITVAPALTLTDKEYQMMRSASIAVLREIGVETGGSNVQWA
VNPADGRMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGFTLDELDNDITGVTPASF
EPTIDYVVTKIPRFAFEKFAGSEPYLTTAMKSVGETMAIGRTIHESLQKALASMETGLTG
FDEVAIPGAEDETDGKAAVIKAISQQTPDRMRTIAQAMRHGLSDDDIHAVTKFDPWFLAR
IREIVEAEAKIRAEGLPQDEHGLRAIKMLGFTDARLAMLTDQREGDIRAARRALGVNAVF
KRIDTCAAEFEAQTPYMYSTYEAPAFGDVECEARPSDKKKVVILGGGPNRIGQGIEFDYC
CCHACFALTDAGYETIMINCNPETVSTDYDTSDRLYFEPLTFEHVMEILTKELENGTLHG
VIVQFGGQTPLKLANALEEEGIPILGTSPDAIDLAEDRERFQALVNQLGLKQPHNGIAST
DAQALEIAEEIGFPLVIRPSYVLGGRAMEIVRDMDQLKRYIAEAVVVSGDSPVLLDSYLS
GAVELDVDAICDGTEVHVAGIMQHIEEAGVHSGDSACSLPPYSLSKEVIAEVKTQTNALA
KALNVVGLMNIQFAVKPDADGKDVIYLIEVNPRASRTVPFVAKSTDSAIASIAARVMAGE
PLSNFPKRAPYEPDAGYDVNVPMADPMTLADPDMPWFSVKEAVLPFARFPGVDTLLGPEM
RSTGEVMGWDRSFARAFLKAQMGAGMVLPSEGRAFISIKDADKGTLMLDAAKILVEQGFT
LVATRGTQSWLDGHGVPCELVNKVYEGRPHVVDMLKDGNVQLLMNTTEGAQAVQDSKDMR
SVALYDKIPYFTTAAGANAAARAIKAQAEGDVEVKSLQG
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaagaaccgatatccaatcgatcatgatcattggtgcggggccgatcatcatt
ggccaagcctgtgagtttgactactcaggcgcgcaagcctgcaaggcgcttcgcgaagag
ggttaccgggtcattctggtcaactcaaacccggcgacgatcatgaccgatccgggtctg
gcggatgccacctacatcgagccgatcacaccggaagtggttgccaagatcatcgaaaaa
gaacgccccgacgcgctgctgccgaccatgggcgggcagaccggtttgaacaccgcgctg
gcgctggaagagatgggcgtgctggccaaattcgatgttgagatgatcggcgccaagcgc
gaagccattgaaatggcagaagaccgcaagctgttccgcgaagcgatggatcggcttggg
ctggagaacccccgcgccacaatcattactgcgccgaagaaagataacggcaatgccgat
ctggacgcaggtgttcagatggccctggacgagttggaagacatcggcctgcccgcaatc
attcgcccggcctttacccttggcgggaccggcggtggggtcgcgtataatcgcgaagat
tacatccacttctgccgctccggcatggatgcctcaccggttaatcagatcctcgtcgat
gagagcctgctgggttggaaagagtatgaaatggaggtggtgcgcgacaccgccgacaat
gcgattatcgtctgctcgatcgaaaatatcgacccgatgggcgtccacacaggtgattcg
atcactgtggccccggcgctgacgctgaccgacaaagaataccagatgatgcggtccgcc
tcgattgcggtgctgcgcgagattggcgtggaaaccggcggatccaacgtgcagtgggcc
gtgaaccctgccgatggccgcatggtggtgatcgaaatgaacccgcgggtgtcgcgctct
tcggcgctggcctccaaggcgaccggcttcccgattgccaagatcgctgccaagctggcg
gttggcttcacgctggatgagctggacaatgacatcaccggcgtaaccccggcatcattt
gagccgaccatcgactatgtcgtcaccaagatcccgcgctttgcctttgagaaattcgca
ggctctgagccctatctgaccacggcaatgaaatcggtcggcgaaaccatggccattggc
cgcaccatccatgagagcctgcaaaaagcgctggcgtcgatggaaaccgggctcacaggc
tttgacgaagtggcaatcccgggtgcagaagatgagaccgatggcaaggccgcggtgatc
aaggcaatcagccagcagaccccggaccggatgcgcaccatcgcacaggcgatgcgccac
ggcctgtccgatgatgacatccacgcggtcaccaagttcgacccctggtttctggcccgt
atccgcgaaatcgtcgaggccgaagctaagatccgcgccgaaggcctgccgcaggacgaa
cacggtctgcgcgcgatcaagatgctggggttcactgacgcgcgtcttgccatgctcacc
gatcagcgtgagggcgatatccgcgcggcccgccgtgcactgggcgtcaatgccgtgttc
aaacgcatcgacacctgtgccgccgagttcgaggcgcagacaccctatatgtattccacc
tatgaggctccggcctttggcgatgtggaatgtgaggcgcgcccttcggacaagaaaaaa
gtcgtcatcctcggcggtggcccgaaccggattggtcaggggatcgagtttgactattgc
tgctgtcatgcttgctttgcgctaacggacgcgggttatgaaaccatcatgatcaactgc
aacccggagaccgtgtcgaccgactatgacacctctgatcggttgtattttgaaccgctg
acgttcgaacatgtgatggaaatcctcaccaaggagctggaaaatggcaccctgcatggg
gtcatcgtgcagttcggtgggcagactccgctgaagctggccaatgcgctagaagaggaa
ggcataccgatcctcggcacctcgcccgacgcgatcgatctggctgaagaccgcgaacgg
ttccaggcgctggtcaaccagctcggcctcaaacagccgcataacggcattgcctccaca
gatgcgcaagcgcttgaaattgcggaagagatcggcttccctctggtaatccgcccgtct
tacgttctgggtggccgcgcgatggagatcgtgcgcgatatggatcagttgaagcgctac
atcgccgaggcggttgtggtctccggggacagcccggttctgctcgacagctatctctct
ggcgcggtggaactggatgtggatgcgatctgcgacggcactgaggtacatgtggcaggc
atcatgcagcacatcgaagaggctggcgtccactccggtgacagcgcctgttcgctgccg
ccctactccctgtccaaagaggtgattgcagaggtcaagactcagaccaacgcattggcc
aaggcgctgaacgtggtcggtctgatgaacatccagttcgcagtgaaacccgatgccgac
ggcaaggatgtgatctacctgattgaggtgaacccgcgtgcctcgcgcaccgtgccgttt
gtggcgaaatccaccgacagcgccatcgcctccatcgccgcccgcgtgatggccggtgaa
ccgctgtcgaatttccccaagcgtgcgccgtatgagccggatgccggctatgacgtcaac
gtgccgatggccgacccaatgacgctggcggatcccgacatgccctggttctcggtgaaa
gaagccgtgctgcccttcgcccgcttccccggcgttgatacgctgctggggccggagatg
cgttccactggtgaggtcatgggctgggaccgcagttttgcccgcgccttcctcaaggcg
cagatgggggccggtatggtgctgccctccgaagggcgcgcgttcatttcgatcaaggat
gccgacaagggcacattgatgctggatgcggcgaaaattctggtggaacagggctttacc
ctggtcgcaacacgcggcacccaaagctggctggacggccatggcgtgccctgcgagctg
gtcaacaaggtctatgagggccgcccccatgtggtcgatatgctgaaggacggcaacgtc
cagctgctgatgaacaccacagaaggcgcgcaggccgtacaggacagcaaggacatgcgg
tccgtcgcgctctatgacaagatcccctatttcaccaccgccgccggcgccaatgccgcc
gcccgcgcgatcaaggcgcaggctgagggcgatgttgaggtgaagagcctgcagggctga
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