Phaeobacter inhibens DSM 17395: PGA1_c24580
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Entry
PGA1_c24580 CDS
T02192
Name
(GenBank) putative serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00260
Glycine, serine and threonine metabolism
pga00460
Cyanoamino acid metabolism
pga00630
Glyoxylate and dicarboxylate metabolism
pga00670
One carbon pool by folate
pga00680
Methane metabolism
pga01100
Metabolic pathways
pga01110
Biosynthesis of secondary metabolites
pga01120
Microbial metabolism in diverse environments
pga01200
Carbon metabolism
pga01230
Biosynthesis of amino acids
pga01240
Biosynthesis of cofactors
pga04981
Folate transport and metabolism
Module
pga_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PGA1_c24580
09102 Energy metabolism
00680 Methane metabolism
PGA1_c24580
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PGA1_c24580
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PGA1_c24580
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PGA1_c24580
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PGA1_c24580
Enzymes [BR:
pga01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PGA1_c24580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
DegT_DnrJ_EryC1
SelA
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AFO92143
LinkDB
All DBs
Position
2564090..2565397
Genome browser
AA seq
435 aa
AA seq
DB search
MPQAPQSWLPEASITRIEDITRATAGAGSDQLLDRIATLVEENRVIHEEDCFNLNPATNV
MNPKAEALLASGLGSRPSLGHPGDKYEMGLEAIEEIEVIAARLACEVFDAEFSEIRVPSG
ALANLYGFMATCRPGDTIIAPPASIGGHVTHHAAGCAGLYGLRSIEAPVLEDGYTVDLEA
LQQLAERERPKLITIGGSLNLFEHPVAGVRAIADQIGAKVMFDAAHQCGIIAGKAWADPL
AEGAHFMTMSTYKSLGGPAGGLIVSNDAEIAKALDSIAFPGMTANFDVAKSAALAVTLLD
WRDHGRAYASEMIAMAKSLAAALEAEGLPLFKTADGITMSHQFALCAAPYCGGQAASKLL
RKNGFLACGIGLPIPAVEGDMNGLRIGTPELVRWGMTSKDAAALAALIAAALRGEAVLDR
VSAWRRQFDRLHFVN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgccccaagcgccccaaagctggcttcccgaagcgagtatcacccgtatcgaggatatc
acccgggccacggccggtgcagggtccgatcaattgctggaccgtatcgcgaccctggtc
gaagaaaaccgtgtgatccacgaggaagactgcttcaacctcaatcccgcgacaaatgtg
atgaatccaaaggcggaggcgttgcttgcctcaggtctggggtcacgcccttcgctgggg
caccccggtgacaaatatgagatggggctagaagcgattgaagaaatcgaggtcatcgca
gcgcgtcttgcctgcgaggtctttgatgcggaattttccgaaatccgggtgccatccggt
gcgttggccaatctctacggctttatggcgacctgccgcccgggcgacaccatcatcgca
ccacccgccagcatcggcgggcatgtgacccatcatgcggccggctgtgccgggctatac
gggctacgcagtatcgaggcgccggtgcttgaagatggctataccgtcgatctggaggcc
ctacagcaactcgcagagcgagagcgccccaagttgatcaccatcggcggcagtctcaac
ctattcgagcaccccgtcgcaggcgtccgggcgatcgcggatcagattggcgccaaagtc
atgtttgacgcggcccatcaatgtgggatcatcgcggggaaggcctgggccgatcctctc
gccgagggcgcccatttcatgaccatgagcacctacaagagccttggcggtcctgccggt
ggattgatcgtcagcaacgacgccgaaatcgccaaggctctagacagtatagcttttccc
ggcatgacggcaaacttcgatgtggcaaaatccgcagccctcgcagtgaccctgctggac
tggcgtgaccacggccgggcctatgcatccgaaatgattgcgatggcaaagagccttgcc
gccgcgctggaggcggaaggcctgccactgttcaaaaccgccgatggcatcaccatgtcc
catcagtttgccctgtgcgcagccccctattgtggtgggcaggcagcttccaagctgctg
cgcaagaacgggtttctggcctgcggaattggcctaccaattcccgcggtagagggcgat
atgaacggcctgcggattggcacgccagaactggtgcgctggggtatgaccagcaaggat
gccgctgcactggccgcgctgatcgcggccgctctgcgcggggaggcggtgctggatcgg
gtttccgcttggcggcggcagtttgaccggcttcacttcgtcaactga
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