Phaeobacter inhibens DSM 17395: PGA1_c25300
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Entry
PGA1_c25300 CDS
T02192
Symbol
fadD2
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00061
Fatty acid biosynthesis
pga00071
Fatty acid degradation
pga01100
Metabolic pathways
pga01212
Fatty acid metabolism
pga02024
Quorum sensing
pga04146
Peroxisome
Module
pga_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PGA1_c25300 (fadD2)
00071 Fatty acid degradation
PGA1_c25300 (fadD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PGA1_c25300 (fadD2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PGA1_c25300 (fadD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pga01004
]
PGA1_c25300 (fadD2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pga04147
]
PGA1_c25300 (fadD2)
Enzymes [BR:
pga01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PGA1_c25300 (fadD2)
Lipid biosynthesis proteins [BR:
pga01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PGA1_c25300 (fadD2)
Exosome [BR:
pga04147
]
Exosomal proteins
Exosomal proteins of breast milk
PGA1_c25300 (fadD2)
Exosomal proteins of breast cancer cells
PGA1_c25300 (fadD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AFO92213
LinkDB
All DBs
Position
complement(2633665..2635398)
Genome browser
AA seq
577 aa
AA seq
DB search
MQQPEATVENTQKIDGNNRFWAEHYAPDIRGYDHQTRRYQRVSDILDTAVRSTPERVGFS
LVLPSGHCLDKTYAEIGRASDAIACYLREDLGLFPGDVAAIQLPNSIHYPVILFGAMKAG
LKVTNLNPLYTPREIVHQLQDSGAKVLFGFNLFADRLQTALRDTAVEQVVIAALWEFFPQ
AASDALRHTITDVAKLVPEYSFDHVPFEDAFAQGMAHGEIHYDLSQIDPGSAAFLQYTGG
TTGVSKGAELTHDNVTHVLEMLNACVHGAMQKTDHGQMSILTVIPYYHIFALIVNLMHFT
AASGRNVLIPNPNPIANLKPAFDNYDIDWLTGVDTLFNGLMAQDWFQQTPPQIGLAIGGG
TSLRPDTARRWSEQIGPIVEGYGMTETTCMIALSPLDGSDKPGTAGQPVPGLEIKITRSD
GAPVGIGEAGELHVRGPNIATAYLNRPDASAETFADGWMATGDIVTMDAEGHLAIVDRKK
DMILVSGFNVYPNELEAVIQSMPGVAEVAVVGEAHPTRGESPAAFVKRADPAVTEEMVIK
YCRANLTAYKVPTQVHFLEELPKSSVGKILRKELRNC
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagccagaagctacagtggaaaacacgcagaaaattgatggtaacaacaggttc
tgggcggaacactatgccccggacattcgcggctatgatcaccaaacccggcgttaccag
cgtgtatctgacattcttgacacagcggtacgcagcacaccggaacgggtcggcttttcg
ctggttcttcccagcggccattgtctggacaaaacctatgctgagatcgggcgcgcgtcc
gacgccatcgcctgctacctgcgcgaggatcttggcctttttccgggtgatgtggccgcg
atccagttgcccaactcgatccactacccggtcatcttgtttggagccatgaaggccggg
ctgaaagtcacgaacctcaacccgctttatacgccgcgcgagatcgtgcatcagctacag
gattccggggcaaaggtgctgtttggcttcaatctatttgccgaccggcttcaaaccgcg
ctgagggatacggctgttgagcaggttgtgattgctgcactttgggagtttttcccgcag
gccgcctctgatgctctccgccatacaatcacggatgttgccaaacttgttccggagtat
tcttttgaccatgtgccgttcgaagacgcatttgcacaggggatggctcatggcgagatc
cattatgatctgtcacagattgaccccggatcagcggcctttctgcaatataccggcgga
accacaggtgtaagcaagggggccgaactgacccacgacaatgtcacccatgttctggag
atgctgaacgcctgtgtgcatggcgcaatgcagaaaacggaccatgggcagatgtccatc
ctgacggtgatcccttactatcatattttcgctttgatcgtgaatctcatgcacttcact
gctgcttcgggccgcaatgtgctgattcccaaccccaatccgattgccaatctgaaaccg
gccttcgacaactatgacattgattggctaaccggggtcgatacattgttcaacgggctg
atggctcaggattggttccagcagactccgccgcagatcggattggccattggcggcggc
acctcgttgcggccggataccgcccgccgctggagcgagcaaatcggcccgattgtcgaa
ggctacggcatgaccgaaaccacttgcatgatcgcgctcagccctctggacggcagcgac
aaacccggcactgccggacagccggtgccggggctggagatcaaaatcacccgttcagac
ggcgcgccggttgggatcggcgaggctggcgagctgcatgtccgcggtcccaatatcgcg
actgcatacttgaaccgccctgacgcatccgccgagacctttgccgatggctggatggcg
actggcgatattgtcacaatggatgccgaaggccatctcgccattgttgaccgcaaaaag
gatatgatcctggtcagcggtttcaatgtttacccgaacgagctggaggcggtgatacaa
tccatgccaggtgtggctgaagttgccgttgtcggtgaagcgcatcctacccgcggtgaa
agccctgccgcttttgtgaagcgggccgaccccgccgtcacagaagaaatggtcatcaag
tactgccgcgctaatctcaccgcctataaggtgccgacccaggtccatttcctcgaggaa
ctgcccaaaagttcggttggcaaaatattgcgaaaggaactgcggaattgctga
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