Phaeobacter inhibens DSM 17395: PGA1_c26160
Help
Entry
PGA1_c26160 CDS
T02192
Symbol
uvrB
Name
(GenBank) uvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PGA1_c26160 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pga03400
]
PGA1_c26160 (uvrB)
DNA repair and recombination proteins [BR:
pga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGA1_c26160 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PGA1_c26160 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_22
AAA_19
UB2H
AAA
DUF87
AAA_25
AAA_16
AAA_7
eIF3_p135
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AFO92284
LinkDB
All DBs
Position
2723475..2725673
Genome browser
AA seq
732 aa
AA seq
DB search
MPYAHSDKSMPMMADRAPQHRPKLEGGREFVMHTEFDPAGDQPTAIKELSEGVLEGERNQ
VLLGATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPENSVEYFVSFYDY
YQPEAYVARSDTYIEKESQINEQIDRMRHSATRSLLERDDVIIIASVSCIYGIGSVETYS
AMTQDLKVGDEYDQRQVMADLVAQQYKRNDQAFQRGSFRVRGDSLEIFPAHLEDRAWRLS
FFGEELEGITEFDPLTGEKTGTFDQIRVYANSHYVTPKPTLKQAVISIKEELKMRLDQLV
GEGKLLEAQRLEQRTNFDIEMLEATGHCNGIENYSRYLTGRAPGEPPPTLFEFIPDNAIV
FADESHVSVPQIGGMYKGDHRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSAT
PSKWELEQSSGVFAEQVIRPTGLLDPQVEIRPVDMQVDDLLDEVRRVTADGFRTLVTTLT
KRMAEDLTEYMHEQGIKVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLDIPEC
GLVAILDADKEGFLRSETSLIQTIGRAARNAEGRVIMYADRITGSMERALGETNRRRDKQ
IAYNEEHGITPATVKKNVEDVLAGLYAGDVDMNRVTATIDKPMHGANLEAHLAGLREQMR
KAAENLEFEEAARLRDEVKRLEAVDLAVSDDPLARQSAIEAASDAAVKSRGRSTAGKAGT
RAYRGKSQKKFS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgccatacgcccattccgacaaatccatgccgatgatggctgaccgcgcgccgcagcac
cgccccaagctggaaggcggacgagaatttgtgatgcatacggaattcgatcctgcaggc
gaccagcccaccgccatcaaggaactctccgaaggggtgctggagggcgagcgcaatcag
gtgctgctgggtgccaccggaacgggcaagacattcaccatggccaaggtgatcgaggaa
acccagcgcccggccatcatacttgcgccgaacaagacgctggcggcgcaattatacgga
gaattcaaaggcttcttccctgagaactcggtcgaatacttcgtctcattctacgattat
taccagccggaggcctatgtcgcgcgctccgacacctatatcgagaaggaaagccagatc
aacgaacagatcgaccggatgcgccactccgccacccggtcgctgctggaacgggatgat
gtgatcatcatcgcgtcggtctcctgtatctatggtatcggctcggtcgagacctattcg
gcgatgacgcaggacctgaaggtcggcgacgaatatgaccagcggcaggtgatggccgat
ctggttgcccagcagtacaaacgcaacgatcaggcgtttcagcgcggcagtttccgggtg
cgcggcgattcgctggagattttccccgcccaccttgaggatcgcgcctggcggctgtcc
ttctttggtgaggagctggagggcatcaccgagttcgaccccctcaccggcgagaaaacc
ggcacattcgatcagatccgggtctatgcaaattcccactatgtgacgccgaaaccgacg
ttgaaacaggcggtcatctcgatcaaggaagagctgaagatgcggctcgaccagttggtt
ggtgaaggcaagctgctggaagcgcagcggctggaacagcgcaccaattttgacatcgaa
atgctggaggccaccggccattgcaacgggatcgagaactactcgcgctatctgaccggc
cgcgcaccgggcgagccgccgccgaccctgtttgagttcatccctgacaatgccattgtt
tttgcagatgaatcccatgtctccgtgccgcagatcggcggcatgtacaagggcgaccac
cggcgcaaattcacgcttgcggagcatggtttccgcctgccctcctgcatggacaaccgc
ccgctgaagttcgaggaatgggacgccatgcgcccgcagtcggtgtttgtctccgccacg
ccatccaaatgggagctggaacaatccagcggcgtctttgccgaacaggtgatccgtccc
accggccttctggacccgcaggtcgaaatccgcccggttgatatgcaggttgacgatttg
ctggatgaggtgcgccgcgtcaccgcagatgggttccgcacgctggtgacaaccctcacc
aaacgtatggccgaggatctgaccgaatatatgcacgaacaggggatcaaggtccgctac
atgcacagcgacattgatacgctggaacggatcgagatcctgcgcgatctgcgtctaggg
gcctttgacgtgctgatcggcatcaacctgttgcgcgaaggtctggatatccccgaatgc
gggttggtcgccattctggatgccgacaaggaggggttcctgcgctcggagacctcgctg
atccagaccatcggccgtgccgcccggaatgccgaaggccgggtcatcatgtatgccgac
cggatcactggttcgatggagcgcgcactgggggaaaccaaccgccgccgtgacaagcag
atcgcctataacgaggaacacggcatcacccccgcaaccgtcaagaaaaacgtcgaggat
gttctggccggtctttacgcgggcgatgtggatatgaaccgcgtgaccgccaccatcgac
aaaccgatgcatggcgccaatctggaagcccatctggccgggctgcgcgagcagatgcgc
aaggccgccgagaacctggagttcgaggaagccgcgcgtctgcgcgacgaggtcaagcgg
ctggaagcggtggatctggcggtctccgacgatccactggcgcggcaatccgcgattgag
gccgcatcagatgccgcagtgaaatcacgggggcgttccactgcgggcaaggctgggacg
cgggcctatcggggcaagtcgcagaagaaattctcatag
DBGET
integrated database retrieval system
