Phaeobacter inhibens DSM 17395: PGA1_c28090
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Entry
PGA1_c28090 CDS
T02192
Symbol
dnaE2
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga03030
DNA replication
pga03430
Mismatch repair
pga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGA1_c28090 (dnaE2)
03430 Mismatch repair
PGA1_c28090 (dnaE2)
03440 Homologous recombination
PGA1_c28090 (dnaE2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pga03032
]
PGA1_c28090 (dnaE2)
03400 DNA repair and recombination proteins [BR:
pga03400
]
PGA1_c28090 (dnaE2)
Enzymes [BR:
pga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGA1_c28090 (dnaE2)
DNA replication proteins [BR:
pga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PGA1_c28090 (dnaE2)
DNA repair and recombination proteins [BR:
pga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PGA1_c28090 (dnaE2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AFO92475
LinkDB
All DBs
Position
complement(2929475..2932987)
Genome browser
AA seq
1170 aa
AA seq
DB search
MTNAPRFIHLRTHTEYSLLEGALRLKKLPDLCKKHEMPAIAVTDSNNLFAALEFSVAASG
AGVQPIMGCQVDLRFTEPTPGERPKPPAPLVLLAQSETGYEHLMKLNSCLYMREGSELAH
VTLEELAAHSEDVICLSGGPDGPVGRLLQMGQRPAAEALMQRLKAMFPDRLYVELQRHPG
EHGQPEAEQATERGHVEMAYAMDLPLVATNDVYFPNTEMYEAHDAMICIAEGAYVDQAEP
RRRLTAQHYFKSQEEMVALFADLPEAIENTVEIAKRCAFMAYRRDPILPKFADDEVAELR
RIANEGLQQRLAVIPHAVSVEDYQERLDFELGIIEGMGFPGYFLIVADFIQWAKDHDIPV
GPGRGSGAGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIKYV
QEKYGRDKVGQIITFGALLSKAAVRDMGRVLQMPYGQVDRLSKLIPVEGVKPMSIVDSLR
EEPRLREEAENEEVVDRLLKYGMQVEGLLRSAGTHAAGVVIGDRPLDALVPLYRDPRSDM
PATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAMDLIFQSGRDLHVAADGTQLYDPPEGAE
NQINAIPLDDTVTYDLYSRAKTVAVFQVESTGMMDALKRMKPTCIEDIVALVALYRPGPM
ENIPVYCEVKNGLRKIQSVHPLIDHILEETQGIIVYQEQVMQIAQVMANYTLGGADLLRR
AMGKKIKEAMDAERPKFEKGAAENGVPAKKASEVFDLLEKFANYGFNKSHAAAYAVVSYQ
TGWLKANHPVEFMAGVMNCDIHLTDKLAIYFEEVKKGLSLPYVPPCVNRSEATFNVVKGE
LVYALGALKNVGVEAMRLVTAARRESGEDKPFATLFDFARRVDLKKVGKRPLEMLARAGG
FDQLDPNRRRVFDSLGALVDYSSAVHDQRNSSQVSLFGEAGEDLPEPRLPGTPDWLPAER
LSEEFKAIGFYLSGHPLDDYMPALKRKDVMTLDEVTAKAERGPFMAKMAGVVAGRQERKS
ARGNRFAFAQLSDTSGGYEVTLFSEVLEKSREFLETGAKVVITAEATMESDQLKLLVRSV
GPVDAAIADAGRSSLRVYISQASAVATVAQVLEDAKSAARNASRGEVYMYLQDPGLPGDV
EMDLGQPFPINPQIKGALKSLDGVMDVEEI
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgctccccgattcattcatctgcgcacccataccgaatattcgctgctggaa
ggcgcgctgcggctgaagaagctgccggatctctgcaagaagcacgagatgcccgcgatc
gcggtgaccgacagcaacaacctgtttgccgcactggagttttccgttgcggccagcggg
gccggggtgcagccgatcatgggctgtcaggtggatctgcggtttaccgaaccaaccccc
ggtgagcggccaaaacccccggcgccgctggtgctgctggcgcagagcgagaccggttat
gagcatctgatgaagctgaattcctgtctctacatgcgcgaaggcagtgagctggcgcat
gtgacgctggaggagctggcggcccattctgaggatgtgatttgcctgagtggcgggccg
gatgggccggtggggcggctcttgcagatgggacagcgtccggcggcagaggcgttgatg
cagcgactgaaggcgatgttcccggatcgtttgtatgtggagttgcagcgccatcccggt
gagcatggccaaccagaggcggagcaggcgaccgagcgcggccatgtggaaatggcctat
gccatggatctgccgttggttgccaccaatgacgtctatttcccgaatacagaaatgtat
gaggcccatgacgcgatgatctgcatcgccgagggcgcctatgtcgatcaggccgagccg
cggcggcgtctgacggcgcagcattacttcaagagccaggaagagatggtcgcgctgttt
gccgatctgcccgaagcgattgagaacacggtggagattgccaaacgctgcgccttcatg
gcgtatcgccgcgacccgatcctgccgaagtttgccgatgatgaggtcgccgaactgcgc
cgcatcgccaatgagggtctgcagcagcgtctggcggtgatcccccatgcggtgagcgtc
gaggactatcaggaacggctcgatttcgagttgggcatcatcgaggggatggggttcccc
ggctatttcctgatcgttgccgattttatccaatgggccaaggatcatgacattccggtg
gggccggggcggggctctggtgcgggctccttggtagcctatgcgttgacgatcactgac
cttgatccgctgcgctacagcttgctgtttgaacgcttcctcaacccggaacgggtgtcg
atgccggactttgacatcgatttctgcatggatcgccgcgaggaggtgatcaaatacgtg
caggagaaatacggccgcgacaaggtggggcagatcatcacctttggcgcgctcctgtcg
aaggcggcggtgcgcgacatgggacgggtcctgcagatgccctatggccaggtggaccgg
ctgtcgaagctgatcccggttgagggcgtgaaaccgatgtccatcgtggacagtctgcgc
gaagagccgcggctgcgcgaggaggcggagaacgaagaggttgtcgaccggctattgaaa
tacggcatgcaggttgaggggctgttgcgatcagcgggcacccacgcagcgggtgtggtg
attggggatcggccgctggatgcgctggtgccgctttaccgcgatccgcgctccgacatg
ccggccacccagttcaacatgaaatgggtggagcaggcggggctggtgaagttcgacttc
ctcggcctgaagacactgaccgtgatccagaacgcgatggatctgattttccagtcgggc
cgcgatctgcatgtggccgccgatggcacccagctttatgatccgccggagggggcggaa
aaccagatcaacgccattccgctggacgacacggtcacctatgacctctactcaagggcc
aagacggtggcggtgttccaggtggaatccaccggcatgatggacgcgctgaagcgcatg
aaacccacctgtatcgaggacattgttgcgctggtggcgctgtatcgtcccggcccgatg
gagaacatcccggtctattgcgaggtcaagaatggcctgcgcaagatccagtcggtgcat
ccgctgatcgaccatatccttgaggaaactcaaggcattatcgtttatcaggaacaggtg
atgcagattgcccaggtgatggcgaactatacgctgggcggtgccgacctgctgcgccgg
gcgatgggtaagaagatcaaagaggcgatggacgccgaacgcccgaagtttgagaaaggc
gcggcggaaaacggcgtgccggccaagaaggcatcggaggtgttcgaccttctggagaaa
ttcgccaactacggtttcaacaaatcccacgctgcggcctatgcggtggtcagctaccag
accggctggctgaaggcgaaccacccggtggagtttatggccggtgtgatgaactgcgat
atccatctgacggataagctggcgatctatttcgaagaagtgaagaagggcctgagcctg
ccgtatgtgccaccctgcgtgaaccgctccgaggcgacgttcaacgtggtcaagggggag
ctggtctatgcgctgggcgcgctgaaaaacgtcggcgtcgaggcaatgcgccttgtgacg
gcggcgcggcgtgagagcggtgaagacaaaccctttgccacgctgtttgattttgcccgc
cgggtggatctgaaaaaggtcggcaaacgcccgctggaaatgctggcgcgggccgggggc
tttgaccagctggaccccaaccgccgccgtgtgttcgacagccttggtgcattggtcgat
tattcgtccgcggtgcatgatcagcgcaattccagtcaggtgtcgctgtttggtgaggcg
ggggaggacctgccagagccgcgtctgcccggcaccccggactggctgcctgctgagcgg
ctgtcggaggagttcaaggcgattgggttctacctctcgggtcatccgctggacgactat
atgcctgcgctgaaacgcaaggatgtgatgacgctggacgaggtcacggccaaagcagag
cgcggcccgttcatggccaagatggccggtgttgtcgccggtcggcaggaacgaaaatcg
gcgcgtggcaatcgctttgcctttgcccagctgtcggacaccagcggcggctatgaggtc
acgctgttttccgaagtgctggagaaatcacgcgaatttctggaaaccggcgccaaggtg
gtgatcaccgccgaggcgacgatggagagcgatcagctgaaactgctggtgcggtctgtc
gggccggtggatgcggcgattgccgacgccgggcgcagttcgctgcgggtctatatctcg
caggcgagtgcggtggcgacggtggcgcaggtgctggaagacgccaaatccgccgcccgc
aacgcctcgcgcggggaggtctatatgtacctgcaggatcccggcctgcccggcgacgtt
gagatggatctgggccagcccttccccatcaacccccagatcaaaggcgcgctgaagtcg
ctggacggggtgatggatgttgaggagatttga
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