Phaeobacter inhibens DSM 17395: PGA1_c28340
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Entry
PGA1_c28340 CDS
T02192
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase [NADP]
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00020
Citrate cycle (TCA cycle)
pga00480
Glutathione metabolism
pga00720
Other carbon fixation pathways
pga01100
Metabolic pathways
pga01110
Biosynthesis of secondary metabolites
pga01120
Microbial metabolism in diverse environments
pga01200
Carbon metabolism
pga01210
2-Oxocarboxylic acid metabolism
pga01230
Biosynthesis of amino acids
pga04146
Peroxisome
Module
pga_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pga_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PGA1_c28340 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
PGA1_c28340 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
PGA1_c28340 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PGA1_c28340 (icd)
Enzymes [BR:
pga01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
PGA1_c28340 (icd)
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Gene cluster
GFIT
Motif
Pfam:
IDH
DUF1843
Motif
Other DBs
NCBI-ProteinID:
AFO92500
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All DBs
Position
2963864..2966236
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AA seq
790 aa
AA seq
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MAVVRAGCRSVRSDLTQNDRPRVQAGPQHPVHPVQRQSLTQVSDIAEKRLWNMAENSTPD
ILYTIVDEAPELASASLLPIIRSFAAAAGVSVGTKDISLAGRILATFPEALSDAQRQSND
LAELGQLVKTPEANVIKLPNISASVPQLTAAIAELQAQGFGIPDYPADPATDAEKEIRAR
YDTIKGSAVNPVLREGNSDRRAAKAVKNFAQNNPHSMGKWSADSKTKVSSMLGNDFYANE
VSATISAAQAGTAKIEFVGKDGAVTVLKDSWPLEEGTVADATFMSAKALSSFLKDAIEDT
KADGTMFSLHMKATMMKVSDPIIFGHAVKAWLGPVWDKFGAEIEAAGGSANSGLGAVLAT
IDGLPNGDAIKAEIAALDRPSMYMVDSDKGITNLHVPSDVIIDASMPAVIRAGGKGWDEA
GNKGDTNCVIPDRCYSTVYDESINFFKANGALDVTTAGSVANVGLMAQKAEEYGSHPTTF
EAPADGTIRIVLANGETLHAHEVEAGDIWRSCTVKKAPIENWIELAMDRQRLTGSEAIFW
LDENRAHDAELIKYVTPALEAAGKSDLFQIMAPREATAQSLKTITAGKDSIAITGNVLRD
YLTDLFPILELGTSAKMLSIVKLMNGGGLFETGAGGSAPKHVQQLVEENHLRWDSMGEFC
ALGESLNFLADSKGNAKAGVLGAAAEAATQGILDHNRSPSRKVGEPDNRASHYWFARYWA
EALAAQGDDAELAAHFAPIAAELAAKEEAILSELAEVQGKAVDLGGYFHADPVKTAAVMR
PSATLNGIIG
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgtccgtgcgggctgccggtctgtcagatcagatctgacacagaatgaccgc
ccccgcgtccaagctggaccgcagcaccccgtccatccggtgcagcgtcaatcgctcacc
caagtttccgatatcgctgaaaaaaggttgtggaatatggcagaaaattcgacccccgac
attttgtataccatcgtagacgaagcccccgagctggccagcgcctctctgttgccgatc
atccgcagctttgccgcggcggcaggtgtctccgttgggaccaaggacatctcgctggcg
ggccgtatccttgcgaccttccccgaagcgttgagcgacgcccagcgtcagagcaatgat
ctggccgaactgggccagctggtaaaaacgcctgaggccaatgtcatcaagctgccgaac
atctcggcttcggtgccgcagctgaccgccgcgattgccgaattgcaggcgcaagggttt
ggcattcccgactacccggcagatcctgcaaccgatgcagaaaaagagatccgcgcgcgc
tatgacaccatcaagggttcggctgtgaacccggtgctgcgcgaaggtaactctgaccgt
cgcgccgccaaagcggttaaaaatttcgcccagaacaacccgcactcgatgggcaaatgg
tccgcagacagcaagaccaaagtgtcctcgatgctcggcaatgatttctatgccaacgaa
gtctccgccaccatctctgccgcgcaggccggtaccgcgaagatcgaattcgtcggcaag
gacggtgcggtcaccgtgctgaaagacagctggccgctggaagaaggcaccgttgcggat
gccactttcatgtcggccaaggcgctgtcgtccttcctgaaggacgccatcgaggacacc
aaagccgacggcaccatgttctcgctgcacatgaaggccaccatgatgaaggtctctgac
ccgatcatctttggccacgcggtgaaggcatggctgggcccggtctgggacaaattcggc
gctgaaatcgaagcggctggcggctctgccaattccggccttggcgcggttctggcaacc
atcgacggcctgcccaatggcgatgcgatcaaggcagagatcgccgcgctggaccgtccg
tccatgtatatggtggacagcgacaagggcatcaccaacctgcatgtgccgtccgatgtg
atcatcgacgcctccatgcctgcggtgatccgggccggcggcaagggctgggacgaagcg
ggcaacaagggcgacaccaactgcgtgatccctgaccgctgctattccaccgtctatgat
gaaagcatcaacttcttcaaagccaatggtgcgctggacgtgaccaccgccggttccgtc
gccaacgtcggcctgatggcgcagaaggctgaggaatacggctctcatccgaccacgttt
gaggcacctgcggatggcaccatccgtatcgtgctggcaaatggcgagacgctgcatgcg
catgaggtcgaggcaggcgatatctggcgttcctgcaccgtgaaaaaggccccgatcgag
aactggatcgaactggcgatggaccgtcagcgtctgaccggctccgaggcaattttctgg
ctggacgagaaccgcgcccatgacgcagaactgatcaaatacgtgacgcccgcgctggaa
gcggcaggcaaatccgacctgttccagatcatggccccgcgtgaggcgaccgcccagtcg
ctgaaaaccatcaccgcaggcaaggacagcatcgccatcaccggcaacgtgctgcgcgac
tacctgaccgacctgttcccgatcctggaactgggcacctcggccaagatgctgtcgatt
gtgaagctgatgaacggtggcgggttgtttgaaaccggggccggtggctctgcgcccaag
cacgtgcagcagctggttgaggaaaaccacctgcgctgggactcgatgggcgaattctgc
gctctgggtgaatcgctgaacttcctcgccgacagcaaaggcaacgccaaggctggcgtg
cttggtgccgctgccgaggcggcgacgcagggcattctggatcacaaccgctcgccctcg
cgcaaggtgggtgagccggacaaccgcgccagccactactggtttgcccgctactgggcc
gaggcgctggccgcgcagggtgatgacgccgaactggccgcgcatttcgcgcccatcgcc
gcagagctggccgccaaggaagaggcgatcctgtccgagctggcagaggttcagggcaag
gccgtggatctgggcggctatttccacgctgatccggtgaaaaccgccgccgtgatgcgc
cccagcgcgacgctgaacggcatcatcggctga
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