Phaeobacter inhibens DSM 17395: PGA1_c30230
Help
Entry
PGA1_c30230 CDS
T02192
Symbol
cpdB2
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga00230
Purine metabolism
pga00240
Pyrimidine metabolism
pga01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
PGA1_c30230 (cpdB2)
00240 Pyrimidine metabolism
PGA1_c30230 (cpdB2)
Enzymes [BR:
pga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
PGA1_c30230 (cpdB2)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
PGA1_c30230 (cpdB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
AFO92678
LinkDB
All DBs
Position
3161174..3163045
Genome browser
AA seq
623 aa
AA seq
DB search
MTGSDQAEDSKVGSLRILATTDLHANLLSHDYYSDKPDPAQGLSRVATLIAQARHEAVEN
GAVTLLLDNGDSIFGTPIAERPLELSDIRPAPVARAFDLLSYDAIGLGNHDFDFGLDQLR
QALLRISCPVLCSNMRALDPQLSLPFCQSTVLERALPDTSGTPPLRIGLISVLPMQTLKW
AAHQLQGKVTIDDMVQSARDHAAALREQGCDVIVALAHTGIGEGHATYGIENALHQLANL
GVLDAIVGGHTHLTLPDPRHPVSAPVVMPGAHGSHLGVIDLRMTWNSDRWAVTKATCTLR
PIARRRTIGGAGGVLTPLVDEDPAMVAALAEDHAETRTRMAQPVGRTSQPLHSYFTFLGR
DQALALVAWAQAAAVRPALTDTLASNLPLLSATAPGKFGARSGPSNYTDVPIGQMYMRHV
VDIQPFPNELRTVVLDGAQLRDWLEMSAGLFNQIAPGTFGSPLLDDDRAGHNFDVIFGVQ
YDIDVSAPARFASDGELANPDSYRIRNLRWKGAPVRDSQHFAVAVSSYRIGGGGNFAMAQ
AATPLPIPPLRVRDAIRDYVAGRLDRDPLEHAPPPWRLFSHPSTEVEIFTGPGARAYLTD
LDPSRHSLHGTTPDGFLRIGVKL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacaggatcggaccaagccgaggacagtaaggtcggatccctgcgcattctggcgacc
acggatcttcacgcaaacctgctcagccacgattactattccgataaacctgatcctgcg
cagggtctgtcgcgcgtggccacgctgatcgctcaggcgcgccacgaagccgtagaaaac
ggtgctgtcactctgcttttagacaatggcgacagcattttcggaaccccgattgcggag
cgcccgctggagcttagcgatatccgccctgcgccggttgcgcgtgcgtttgatctgctc
agctatgacgccatcggccttggaaatcacgacttcgatttcgggttggatcagttgcgg
caggcactattgcggatcagctgcccggtactctgctcaaatatgcgggcgctggacccg
cagctgtcccttccgttctgccaatccaccgtgctcgaacgcgcactcccggatacctca
ggcacaccgccgctgcgcattggcctgatctcagttctgccgatgcagacactcaaatgg
gcggcccatcaacttcaaggcaaagtcacgatcgacgacatggtgcaatccgcacgcgat
catgccgctgccttacgcgaacagggctgtgacgtcatcgtggcgctcgctcataccggg
atcggcgaaggacacgcaacctacggtattgaaaacgctctccatcagctggccaatctt
ggcgtgctggacgcgatagttggcggccacacccatctgacgctgcccgatccacgccac
ccggtttccgcgccggtcgtgatgcccggggcccatggctcacatcttggcgtaatcgac
ttgcggatgacgtggaactctgatcgctgggctgtgaccaaggccacctgtacgctccgc
cccatcgcccgacgcagaaccatcggcggcgctggcggcgtactgacgcctctggtggac
gaagatcccgcaatggtcgcggcgctcgcggaagatcatgccgaaacacggacccgcatg
gcgcaacctgtgggacgcaccagccaaccgctgcattcctatttcacttttctcggccgc
gatcaggctcttgcgctggtggcttgggcccaggcggctgcagtgcgtccggccctgaca
gataccctggccagcaacctgcccctgctctcagcgacggcccccggcaaatttggcgca
cgctccggcccctcaaattacacggatgtaccgatcgggcagatgtatatgcgccatgtc
gtcgatatacagcctttcccaaacgagttgcgcaccgtggttctggatggcgcccagctg
cgcgattggctggaaatgtcggccgggttgttcaatcagatcgcgcccggcacctttggc
tccccattgttggacgacgatcgggccggccataatttcgatgtcattttcggtgtccaa
tacgatatcgatgtctccgcaccagcccggtttgccagcgatggagaactcgcaaatccg
gatagctaccggatccgcaacctccgttggaaaggggcgccggtgcgcgacagtcagcat
ttcgcggtagcggtcagcagctatcgcatcggtggcggcggtaatttcgccatggcccag
gccgccacgccgctgccgattcccccgttgcgggtgagagacgcgatccgcgactacgtg
gccgggcgtcttgatcgtgacccattggaacacgctcctcctccctggcgcctgttcagc
catccctccacagaggttgagatctttaccgggcccggagcccgcgcctatctcaccgat
cttgatccgtcccgccacagcctccatggcaccacccccgacgggtttctaaggattggc
gtcaaattgtga
DBGET
integrated database retrieval system
