Phaeobacter inhibens DSM 17395: PGA1_c30260
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Entry
PGA1_c30260 CDS
T02192
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga03030
DNA replication
pga03430
Mismatch repair
pga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGA1_c30260 (dnaX)
03430 Mismatch repair
PGA1_c30260 (dnaX)
03440 Homologous recombination
PGA1_c30260 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pga03032
]
PGA1_c30260 (dnaX)
03400 DNA repair and recombination proteins [BR:
pga03400
]
PGA1_c30260 (dnaX)
Enzymes [BR:
pga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGA1_c30260 (dnaX)
DNA replication proteins [BR:
pga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PGA1_c30260 (dnaX)
DNA repair and recombination proteins [BR:
pga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PGA1_c30260 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_30
RuvB_N
AAA_5
AAA_22
AAA_19
AAA_14
AAA_16
Rad17
AAA_24
SLFN-g3_helicase
AAA_18
DUF815
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
AFO92681
LinkDB
All DBs
Position
3165067..3166887
Genome browser
AA seq
606 aa
AA seq
DB search
MSDTAGDTAGQSQYQVLARKYRPETFADLVGQDAMVRTLKNAFAADRIAQAFIMTGIRGT
GKTTTARIIAKGMNCIGEDGQGGPTTEPCGKCEHCTAIMEGRHVDVMEMDAASRTGVGDI
REIIDSVQYRAASARYKIYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPV
TVLSRCQRFDLRRIEPEVMIGLLQKIAGAENAQIAEDALALITRAAEGSARDATSLLDQA
ISHGAGETTADQVRAMLGLADRGRVLDLIDMILRGDAAAALTELSAQYAEGADPLAVLRD
LAEITHWVSVVKITPDAAEDPTVSPDERARGSQMAEALPMRVLTRMWQMLLKALEEVAAA
PNAMMAAEMAVIRLTHVADLPTPEQLMRTLQDTPPPPPPSGHMNAPMGSSGGPSGAPQGA
GGYVPQQPGPQGGMPSGPQGGPTMSTGNGQATALAPQVDSALARYPSFEHVIELIRVKRD
GLLLEYVKTYLRLVSYQPGRITIQPTDDAPKDLAARLGQQLQTWTHARWVISLANEGGGE
TITERDNAAENALRAEASTHPMVQAVLESFPKAKIRHIRTAEDLAAEVEAEALPEVEDEW
DPFEEE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacagcaggcgacacagcaggccaatcccaataccaggttctggcacgcaaa
taccggcccgaaacctttgccgatctggtgggccaggacgccatggtgcggacgctgaaa
aacgcctttgccgccgaccggattgcccaggccttcatcatgacgggcattcgcggcact
ggtaagacgacaaccgcacggatcattgccaagggcatgaactgtatcggcgaggatggt
cagggaggcccaaccacggaaccctgcggcaaatgcgaacattgcacggcgatcatggaa
ggtcggcatgtcgatgtgatggagatggacgccgccagccgaacgggcgtgggcgacatc
cgcgaaattatcgattcggtgcagtaccgcgccgcttctgcccgctataagatctacatc
atcgacgaagtccacatgctgtcgacctccgccttcaacgcgctgttgaagacgctggag
gaaccgcccgcacatgtgaaattcatcttcgcgaccacggagatccgcaaggtaccagtg
accgtcctgtcgcgctgccaacgctttgatttgcgccgcattgagcctgaggtaatgatc
ggccttctgcaaaagattgcaggggcggaaaatgcccaaatcgccgaggacgcgctggcg
ctcatcacccgcgccgccgaaggctctgcccgcgatgccacctcgctcctagatcaggca
atttcgcatggcgccggcgagacaaccgcggatcaggtccgcgccatgttggggttggcg
gatcgcgggcgggtcttggacctcatcgacatgattctgcgaggcgacgcggctgcggcg
ctgaccgaactcagcgcgcaatatgccgagggcgccgacccgctggcagtgctacgcgat
cttgctgaaatcacccattgggtgtcggtggtgaagattacccccgatgccgccgaagac
cccaccgtcagcccggatgagcgcgcccgtggcagccaaatggccgaggcgctgccgatg
cgtgtcctgacgcggatgtggcagatgctgctgaaggcgctggaagaggtcgccgcagcc
cccaatgcgatgatggcggccgaaatggcggtgatccgcctgacccatgtggcagatctg
ccgacgcctgaacagctgatgcgcaccctgcaggatacgccgccgcccccgccacccagc
gggcatatgaacgcgcccatggggagctctggcggaccatctggcgccccccaaggcgca
ggcggttacgtcccccagcaacccggaccgcagggcggcatgccaagcggtccccagggc
ggaccaacgatgtcgacaggcaacggacaggcaaccgcgctcgccccgcaggtagatagc
gcgcttgcccgctatcccagctttgagcatgtgatcgaactgatccgggtaaagcgcgac
ggtttgctgctggaatatgtgaaaacctacctgcgtctggtgtcctatcaacccggccgg
atcaccatccagcccacggatgacgcgcccaaggatctcgccgcgcgtctgggccagcag
ttgcagacctggacccatgcccgttgggtgatctccctcgccaatgagggtggcggtgag
acgatcaccgaacgtgacaacgccgcagagaacgccctgcgagcggaggccagcacccac
ccgatggtgcaggcggtccttgagagcttccccaaggcaaagatcagacacatccgtaca
gcagaagatctcgccgccgaggtcgaggcggaagccctgccagaggtcgaggacgaatgg
gatcccttcgaagaagagtga
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