Phaeobacter inhibens DSM 17395: PGA1_c30430
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Entry
PGA1_c30430 CDS
T02192
Name
(GenBank) transcriptional regulator, TetR family
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
pga
Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pga03000
]
PGA1_c30430
Transcription factors [BR:
pga03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PGA1_c30430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_13
TetR_N
TetR_C_13_2
TetR_C_6
TetR_C_11
TetR_C_29
TetR_C_43
TetR_C_24
TetR_C_25
Motif
Other DBs
NCBI-ProteinID:
AFO92695
LinkDB
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Position
3178951..3179550
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AA seq
199 aa
AA seq
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MSTRMSDTRLHILDTGRALTAQRGYTSVGLTELLATAQVPKGSFYHYFASKEDYGCALLR
HYVEQYRIELAPTLNNPSLTGSDQVLSYVTAWQERQSSDMAGQKCLIVKLAAEIADLSPA
MRGILQQAVEGITVRLADCLRKGQQDGSLSPDVDPVQTATSLYQIWLGASLMAHLSQDST
PFDTAMVQTRTMLPPPRQT
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgtctactcgcatgagtgacacccgactgcatattctggacaccggacgcgccctgacg
gcgcagcgcggctatacctccgtcggcctgacggagctgctggcgacggcacaggtgccc
aaggggtctttctaccactacttcgcctccaaagaggactacggctgcgccctgctgcgc
cattacgtggagcagtaccggattgagctggcgccaacgctgaacaacccgtcgctgaca
gggagcgatcaggtgctgtcctatgtcaccgcctggcaagagcggcagagctcggacatg
gccggtcaaaaatgcctcatcgtcaaactggccgctgaaatcgcggatctctccccggcg
atgcgcggcatcctgcaacaggccgttgaaggcattactgtccggctagccgattgcctg
cgtaaaggtcagcaggacggctctctcagcccggacgtcgaccccgtccagactgcaaca
tccctctatcagatctggcttggggccagcctgatggcccatctgtcgcaagacagcacc
ccgtttgacaccgccatggtccagacccggaccatgcttcccccgccccggcaaacctag
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