Phaeobacter inhibens DSM 17395: PGA1_c33420
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Entry
PGA1_c33420 CDS
T02192
Name
(GenBank) DNA polymerase 3-like protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga03030
DNA replication
pga03430
Mismatch repair
pga03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGA1_c33420
03430 Mismatch repair
PGA1_c33420
03440 Homologous recombination
PGA1_c33420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pga03032
]
PGA1_c33420
03400 DNA repair and recombination proteins [BR:
pga03400
]
PGA1_c33420
Enzymes [BR:
pga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PGA1_c33420
DNA replication proteins [BR:
pga03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PGA1_c33420
DNA repair and recombination proteins [BR:
pga03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PGA1_c33420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
AFO92981
LinkDB
All DBs
Position
3502087..3503115
Genome browser
AA seq
342 aa
AA seq
DB search
MKLSPREADGYFAKPDPGKTGFLIYGPDAMRVSLKRQQMLAALLGPTAEEEMRLTRMPAA
DLRKDPALLMDAVKAVGFFPGIRAVFVEDANDTAAPAVIAALEGWQQGDAQIIVTAGQLK
ASSKLRKAFEGHRNAYATGIYDDPPSRGEIERILGTARIRDVPGDSMSALVDIANEIGPG
DFSRMVEKLALYKYEDSTPLTLDDIQAIAPQSTEAAVDDMLNIVAEGRGAEIGPLMGRLQ
AQGTNAVTLCIGATRHFRTLYTIASDPGGPAQGIGRLRPPAYGKRRERLLRQAQSWGAFK
LETALTLLTDTDLQLRSAGQTAPALALMERALIQLARLSRVG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgagcccgcgcgaggcggatggatacttcgccaaaccggatccgggcaagacc
ggctttttgatctacggtcccgatgccatgcgcgtctcattgaaacgtcagcaaatgctg
gcggcgctacttggccccaccgccgaagaagaaatgcgcctgacccggatgcccgcagct
gacctgcgcaaggatcctgcgttgctgatggatgcggtcaaggccgtgggttttttcccc
ggcatccgtgccgtgtttgtcgaagacgccaatgatactgccgcccctgccgtgatcgcc
gcacttgagggctggcaacaaggtgatgcgcagatcattgtgacagccgggcaattgaaa
gcctcctcgaagctgcgcaaggcgtttgaggggcaccgcaatgcctatgcaaccggcatc
tatgacgatcctccgtcacgcggtgaaatcgagcgcattctgggtacggcccgtattcgt
gatgtgccaggggacagcatgtctgcgctggttgatatcgccaatgagatcggtcccggc
gatttttcccgcatggtggagaaactggcgctgtacaaatacgaggacagcaccccgctg
acgcttgacgatattcaggccatcgccccgcaatcgaccgaagcggcagtcgacgacatg
ctcaatatcgtggccgaagggcgcggcgcagaaatcggcccgctgatggggcggttgcag
gcgcagggcaccaacgcggtgacactctgtatcggggcaacccgccattttcgcacgctt
tacaccattgcctctgatcctggcggtccggcgcagggtatcgggcgactgcgcccgccg
gcctatggcaagcgccgtgaaaggctgctgcgacaggcccagagctggggtgcgttcaag
cttgaaaccgcgctcaccttgctgacggacaccgatcttcagctgcgctcggcagggcaa
accgctccggcgcttgccctgatggaacgggcgttgatccagctggcccgcctcagccgg
gtggggtag
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