Phaeobacter inhibens DSM 17395: PGA1_c34260
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Entry
PGA1_c34260 CDS
T02192
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
pga
Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pga03032
]
PGA1_c34260 (hupB)
03036 Chromosome and associated proteins [BR:
pga03036
]
PGA1_c34260 (hupB)
03400 DNA repair and recombination proteins [BR:
pga03400
]
PGA1_c34260 (hupB)
DNA replication proteins [BR:
pga03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PGA1_c34260 (hupB)
Chromosome and associated proteins [BR:
pga03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PGA1_c34260 (hupB)
DNA repair and recombination proteins [BR:
pga03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PGA1_c34260 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF2267
GP68
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
AFO93062
LinkDB
All DBs
Position
3591776..3592063
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AA seq
95 aa
AA seq
DB search
MSKPMTKTQLVAALAEEMDSDKKAAGAALDAVCALITREVSGGGAVTLPGVGKIYCRERP
EREVRNPATGEKFTKEADKVVKMTIAKALKDSVNG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgatgaccaagacccagcttgttgccgcactggctgaagagatggacagc
gacaagaaggccgcaggcgcagcacttgacgctgtttgcgcgctgatcactcgcgaagta
tccggcggtggcgctgtgactctgcccggcgttggcaagatctactgccgtgagcgcccc
gagcgcgaagtgcgcaacccggccaccggtgagaaattcaccaaagaggccgacaaggtg
gtcaagatgaccatcgccaaagcgctgaaagacagcgtgaacggctaa
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