Phaeobacter inhibens DSM 17395: PGA1_c34380
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Entry
PGA1_c34380 CDS
T02192
Name
(GenBank) putative spermidine/putrescine transport system extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PGA1_c34380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pga02000
]
PGA1_c34380
Transporters [BR:
pga02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PGA1_c34380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
HicB-like_2
Motif
Other DBs
NCBI-ProteinID:
AFO93074
LinkDB
All DBs
Position
complement(3604470..3605576)
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AA seq
368 aa
AA seq
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MKLTKLTALAATTALCAPMAMAADMANEMTIVSWGGAYQESQLKAYVVPYQEMHPDLKVI
WDESSAEATAKMRAMTEAGNVTWDLVDVVASDAMRMCDEGLAAELDHDEVLAAAPDGTPA
SEDFGELIVSDCFVPQIVYSTTFGYRMDKVGDTPPSSICDIFDTAKYPGKRALQKRPIDN
VEWALYCDGVAKDEIYDVLSTDEGVERALTKLDSIKDQVVWWTAGAETPQLLADGEVVMG
STFNGRLFSAIAEQNQPIDMLWDMQSFDLDGWIVPADLPEDRKARVMDFLKFATDTQRLA
DQAKFISYGPARASSAPLVGKHAILGIDMAPHMPTDPANAGNVHVYDYEWWADNRDDLDA
KFQAWLAK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaccaaactgactgccctggcggccaccacggcgttgtgtgcgccgatggcg
atggccgccgatatggccaacgaaatgaccatcgtgtcctggggcggcgcctatcaggaa
agccagctgaaggcatatgtcgttccctatcaggaaatgcaccctgatctgaaagtgatc
tgggacgaaagctcggccgaagcgaccgcaaaaatgcgcgctatgaccgaagctggcaat
gtgacctgggatctggtcgatgtggttgcctccgacgccatgcgcatgtgtgacgaaggt
ctggccgctgagctggatcacgacgaagtgctggctgcggcgcccgacggcacccccgca
agcgaagacttcggcgagctgatcgtgagcgactgctttgtaccgcagatcgtgtattcg
accactttcggttatcgcatggacaaagtgggtgacaccccgccatcctccatctgcgat
atctttgacactgcaaaatatcccggcaagcgcgccctgcagaagcgtccgatcgacaac
gttgaatgggctctgtactgcgatggcgtcgccaaggatgagatctatgacgtgctgagc
actgatgaaggtgtggagcgcgcgctgaccaagctggacagcatcaaggatcaggtcgtc
tggtggaccgctggcgcagaaacgcctcagctgctggccgacggtgaagtcgtcatgggc
tcgaccttcaacggccgcctgttctcggccatcgctgagcagaaccagccaatcgatatg
ctgtgggacatgcagtcctttgacctcgacggctggattgttcctgctgacctgcccgaa
gatcgcaaggctcgcgtgatggacttcctgaagttcgccaccgacacccagcgtctggct
gatcaggcgaaattcatctcctatggtccggcgcgtgcgtcgtctgcaccgctggttggt
aagcacgccattctgggtatcgatatggcgccgcacatgccaaccgatccggcaaatgct
ggcaacgtgcatgtctatgactacgaatggtgggccgataaccgtgatgatctggatgca
aaattccaggcatggctggccaagtaa
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