KEGG   Phaeobacter inhibens DSM 17395: PGA1_c34520
Entry
PGA1_c34520       CDS       T02192                                 
Symbol
alkB
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
pga  Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:pga00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pga03400]
    PGA1_c34520 (alkB)
Enzymes [BR:pga01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     PGA1_c34520 (alkB)
DNA repair and recombination proteins [BR:pga03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    PGA1_c34520 (alkB)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 VacA2
Other DBs
NCBI-ProteinID: AFO93088
LinkDB
Position
complement(3619231..3619920)
AA seq 229 aa
MPPATARSRPVSRITAVFDRGAVKNGLTVMMKLRLRGFELTKPLLDMDGQQRLIECLRPI
LRAAPLFSPEVPGGGKMSVRMTSAGAYGWFSDRDGYRYEERHPTGRRWPEIPSEILDIWR
VITGLERQPDCCLINYYGEGARMGLHQDKDEADFSYPVVSVSLGDDGLLRIGNQSRGGKT
DTVWLNSGDVVVMGGDARLTYHGVDRIRFKSSRLLPKGGRINLTLRVVT
NT seq 690 nt   +upstreamnt  +downstreamnt
atgccccctgcaaccgccagatcgcgtcctgtttcgcgaattacagcggtttttgacagg
ggagcggttaagaacgggctaacagtgatgatgaagttgcgattgcgggggtttgagctg
acaaaaccccttctggatatggacgggcagcagcggctgattgagtgtctgcgccccatt
ctgcgcgcagcaccactgttttcgcctgaggtgcccggtggcggtaagatgtctgtgcgg
atgacatcagccggggcctatggctggttcagtgaccgggatggataccgctatgaagag
cgccacccgaccgggcgccgctggcctgagataccatcagagattctggacatctggcgg
gtcatcactgggttggagcgacaaccggattgttgcctgatcaattattatggtgaaggc
gcccggatggggctgcatcaggacaaggatgaggcggatttttcctacccggtggtgtca
gtctctctaggcgatgacggtctgttgcggattggcaatcaatcgcgcgggggcaagacc
gatactgtctggttgaactcgggtgatgtggtcgtgatgggtggggatgcccggctgacc
tatcacggggttgatcgcattcggttcaaatcctcacgcctgctgccgaagggcgggcgg
atcaatctgacgctgcgtgtggtgacctga

DBGET integrated database retrieval system