Phaeobacter inhibens DSM 17395: PGA1_c34840
Help
Entry
PGA1_c34840 CDS
T02192
Name
(GenBank) putative tRNA-nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pga
Phaeobacter inhibens DSM 17395
Pathway
pga03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PGA1_c34840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pga03019
]
PGA1_c34840
Enzymes [BR:
pga01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PGA1_c34840
Messenger RNA biogenesis [BR:
pga03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PGA1_c34840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Thump_like
Motif
Other DBs
NCBI-ProteinID:
AFO93120
LinkDB
All DBs
Position
complement(3656976..3658130)
Genome browser
AA seq
384 aa
AA seq
DB search
MTRVKAKWLEDPAVQHVCEVLTKGGAEVYFVGGCVRNALLGVPVSDLDLSTNVAPQRVMA
LAEEAGIKAIPTGIDHGTVTLVYRGTPYEITTFRRDVATDGRRAVVAFADRIEEDAARRD
FTMNALYARPDGVLVDPLNGLPDLHARAVRFIGSAAQRIREDYLRSLRYFRFHAWYGNSD
AGFDPDALSAIAENLDGIGRLSRERVGSEVLKLLAAPDPAPAIAVMRQVGLLSLILPGSD
DRALGPLIHLEGDISADPLCRLAALGGDAPWEALRLSKSQAADVRLLRAGAEGTDGPATL
AYHHGVSTARNVMLLRSALFEAPIAPDVETEITKGAAAVFPLSAKDLMPDLQGPALGAAL
KTLQKDWIRSGFMLDRDALLKRLL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtgtcaaagcaaaatggctggaagatccagctgtgcagcacgtttgcgaggtc
ctgacaaagggtggggcggaggtctattttgtcggcggctgtgtacgcaacgcgctattg
ggggtaccggtttcggatcttgatctctcgaccaatgtagctccacagcgtgtcatggcc
ctcgccgaagaggccgggatcaaggccataccaacaggcattgaccatggcaccgtgaca
ttggtctatcgcggaaccccttatgagatcaccacgtttcgccgtgatgtggctaccgat
gggcgtcgcgccgtcgtggcatttgccgaccggatcgaggaggacgctgcgcggcgcgat
ttcacaatgaatgcactctatgcccgccccgatggggtgctggtggacccgctgaatggc
ctgccagatttgcatgcacgggcggtccggttcattggcagtgccgcacagcggatccgt
gaggactacctccgctcactgcgctatttcagatttcatgcctggtatggcaactcagat
gccggattcgacccggacgcattatcggctatcgccgaaaacctggatgggattggtcgt
ctctcgcgcgaacgggtgggcagtgaagtgctgaagctgctcgcagcgcctgatccggcg
ccggcgatcgcggtgatgcggcaggttggcctgctatctctgattcttccgggaagtgat
gatcgtgctctggggccgctcatccatctggagggggacatatctgccgatccgctttgc
cgcctggccgcgctgggtggggatgcgccatgggaggcgctgcgcctgagtaaatcccaa
gctgcggatgtgcgcctgctgcgtgcaggtgcggaaggaacggacggaccggcgacactg
gcttatcatcacggcgtgagcacggcgcgcaatgtgatgctgttgcgatccgccttattc
gaggcgccgatagcacctgatgtagagactgaaattaccaaaggagccgcagcggtattt
ccgctctctgccaaggatttgatgccggatctgcaggggccagcgctgggtgcggcgctc
aaaaccttgcaaaaggactggatcagatctgggttcatgctcgaccgcgatgcgttgttg
aaacggctgctctag
DBGET
integrated database retrieval system
