Phaeobacter inhibens DSM 17395: PGA1_c36020
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Entry
PGA1_c36020 CDS
T02192
Name
(GenBank) putative 3'-5'-exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pga
Phaeobacter inhibens DSM 17395
Brite
KEGG Orthology (KO) [BR:
pga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pga03016
]
PGA1_c36020
Enzymes [BR:
pga01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
PGA1_c36020
Transfer RNA biogenesis [BR:
pga03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PGA1_c36020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
LytR_cpsA_psr
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AFO93237
LinkDB
All DBs
Position
complement(3769795..3770409)
Genome browser
AA seq
204 aa
AA seq
DB search
MANHLYQNDLPDGLDLGPVVAIDCETMGLNPHRDRLCVVQLSGGDGNAHMVQIAKGQSEA
PNLCAMLEDPNVLKLFHFGRFDIAAMYHAFGALAAPVYCTKIASRLVRTYTDRHGLRNLT
QELIGVDISKQQQMSDWGAAQLSDAQLDYAASDVLHLHRLRAALDKRLDREDRSEMAQAC
FDFLPMRAKLDLAGWSDTDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
ttggccaatcacctctatcaaaacgacttgcccgacgggctcgatctggggccggtggtc
gcgatcgactgcgagacaatggggctcaacccgcatcgggatcggctctgtgttgtccag
ctgtcgggcggtgacggcaatgcccacatggtgcagatcgccaaggggcagtccgaagcg
ccaaatctttgcgcgatgcttgaggaccccaacgttctgaaattgtttcattttggccgg
ttcgatattgccgcgatgtatcatgcctttggcgcattggcggccccggtgtattgtaca
aagatcgccagccgtctggtgcggacctatacggatcgccatgggctgagaaacctgacg
caggagctgatcggcgtggatatttccaaacaacagcagatgagcgactggggtgccgcg
cagctgagcgacgcacagcttgattatgccgcctccgacgtgctgcacctacaccgtttg
cgtgccgctctggacaagcgtctggatcgcgaagaccgcagcgaaatggcccaagcttgc
ttcgatttcctgccaatgcgggccaagttggacctcgcgggttggtctgacacagacatc
tttgcacactcatga
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