Plasmodium gaboni: PGSY75_0110800
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Entry
PGSY75_0110800 CDS
T08136
Name
(RefSeq) putative transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
pgab
Plasmodium gaboni
Pathway
pgab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PGSY75_0110800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgab03021
]
PGSY75_0110800
Transcription machinery [BR:
pgab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
PGSY75_0110800
Prokaryotic type
Archaeal type
TFB
PGSY75_0110800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DUF1289
zf-C2HC5
ArfGap
Motif
Other DBs
NCBI-GeneID:
29774281
NCBI-ProteinID:
XP_018643944
UniProt:
A0A151LX28
LinkDB
All DBs
Position
1:<298189..>299389
Genome browser
AA seq
342 aa
AA seq
DB search
NVSNENNNVRRKMLRNFRNSRNTSCPDCKEKGIIICDTSEGTQICNGCGMVVESKILSEE
QEWRNFQNDGQSKNTDRNRVGEISDIWLENNLTSTTFIKSSKKLQHLNMMTQINKNDQTL
ISAFNILKLICDTFFLRSNVIERAKEITKELQDMEQLKNRINNLNMLAVVYLACREAGHI
KSIKELITFDRSYKEKDLGKTINKLKKVLPTRAFVYNENISHLIYSLSNRLQLSIDLIEA
IEYVVKKASTLITTSHRLNSLCGGSIHLIVELNTSEEKNLKLPNISQIATVCGVTTNTLK
TTFKELLNAAEYIIPKYYLSEDNPKLSLLKQKYLSEDKRKKK
NT seq
1031 nt
NT seq
+upstream
nt +downstream
nt
ccaatgtaagcaatgagaataacaatgtgaggaggaagatgctaagaaactttaggaata
gccgaaatacttcatgtcctgactgtaaagaaaaaggaataataatatgtgacactagtg
aaggtactcaaatatgtaatggatgtggaatggttgttgaaagtaagattttatctgaag
aacaggagtggagaaattttcaaaatgatggtcagtcaaaaaatacagatagaaataggg
taggtgaaataagtgatatatggttagaaaataatttaacaagtactacatttattaagt
ctagtaagaaattacaacatttaaatatgatgacacaaataaataagaatgatcaaacct
taatttctgcattcaatattttaaaattaatttgtgatactttctttctgaggagtaatg
ttattgagagggccaaggaaataacaaaggagttgcaggatatggaacagctaaagaatc
gcataaacaacctgaacatgctagccgttgtatatttagcatgcagagaagcaggtcata
taaagagtataaaagaattaattacatttgatagatcatataaagagaaagacttgggga
agacaataaataaattaaagaaagtacttccaacaagagcttttgtttataatgagaata
tatctcatttaatatattctttatcaaacagattacaattatcaattgatttaatagagg
caatagaatatgtagtaaaaaaagctagtacattaattactacatctcatagattaaatt
cactctgtggtggttcaatacatttaatagttgaattaaatacaagtgaagaaaaaaatc
tgaaactaccaaacatatcacaaatagcaacagtatgtggagttacaacgaatacactaa
aaacaacattcaaagaattattaaatgcagcagaatatataattcctaaatattatctct
cagaagataatcctaaattgtcattgcttaaacaaaaatatcttagtgaggataaaagaa
aaaaaaaataa
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