KEGG   Plasmodium gaboni: PGSY75_0205500
Entry
PGSY75_0205500    CDS       T08136                                 
Name
(RefSeq) putative DNA-directed RNA polymerase II 16 kDa subunit
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pgab  Plasmodium gaboni
Pathway
pgab03020  RNA polymerase
pgab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pgab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PGSY75_0205500
  09124 Replication and repair
   03420 Nucleotide excision repair
    PGSY75_0205500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgab03021]
    PGSY75_0205500
   03400 DNA repair and recombination proteins [BR:pgab03400]
    PGSY75_0205500
Transcription machinery [BR:pgab03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PGSY75_0205500
DNA repair and recombination proteins [BR:pgab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PGSY75_0205500
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 29774344
NCBI-ProteinID: XP_018643712
UniProt: A0A151LWD0
LinkDB
Position
2:complement(139456..140068)
AA seq 132 aa
MANNINGDVKNLDLGPDFKNCKCLNLCELQLILGDQLRLTSKRNEEAQALIKSSYDYANK
FATIKNRSSIVDVRTNLERIGDLHEYEIAMLVNLLPKTILEARYLIPSLIRLNDETLNSI
LEHLISYKMYVS
NT seq 399 nt   +upstreamnt  +downstreamnt
atggcaaataatatcaatggagatgtaaaaaatttagaccttggtcctgattttaagaat
tgtaaatgtttgaatttatgtgagcttcaattaattttgggagaccagcttcgattaaca
tccaagagaaatgaagaagctcaagcattgattaaatcgtcctatgattatgcaaataaa
tttgctactataaaaaatagaagttcaattgtcgacgtcagaactaacttagaacgtata
ggagatttacatgaatatgaaatagccatgctcgttaatcttttgcctaagaccatatta
gaagctagatatttaattccttcattaattcgtttaaatgatgaaacgttaaattctata
ttagaacatcttataagttataaaatgtacgtttcttaa

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