KEGG   Plasmodium gaboni: PGSY75_0209800
Entry
PGSY75_0209800    CDS       T08136                                 
Name
(RefSeq) ATP-dependent RNA helicase UAP56
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
pgab  Plasmodium gaboni
Pathway
pgab03013  Nucleocytoplasmic transport
pgab03015  mRNA surveillance pathway
pgab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PGSY75_0209800
  09122 Translation
   03013 Nucleocytoplasmic transport
    PGSY75_0209800
   03015 mRNA surveillance pathway
    PGSY75_0209800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pgab03019]
    PGSY75_0209800
   03041 Spliceosome [BR:pgab03041]
    PGSY75_0209800
Enzymes [BR:pgab01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PGSY75_0209800
Messenger RNA biogenesis [BR:pgab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PGSY75_0209800
Spliceosome [BR:pgab03041]
 Complex C
  Other components
   EJC/TREX
    PGSY75_0209800
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    PGSY75_0209800
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Utp25_C
Other DBs
NCBI-GeneID: 29774383
NCBI-ProteinID: XP_018643756
UniProt: A0A151LWL2
LinkDB
Position
2:complement(<292481..>294217)
AA seq 458 aa
MASMDHNAQDELVDYEDDENILDSKDVKGNLGNNILNNNNKGGAMRGSYATVHTGGFKDF
FLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLDTN
ENQDMQDTKEMNNENNNNNGENKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVY
GGISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMR
SDVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVK
LQEKDKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIE
RYDKFKKFENRILVSTDLFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAV
TFVSSQEDTLALNEVQTRFEVAISEMPNKIDCNEYINQ
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggcatcaatggatcataatgctcaagatgaattagtagattatgaagatgatgagaat
atattagatagcaaagatgttaaagggaatttaggaaataatattttaaataataataat
aagggtggagctatgagaggtagttatgcaactgtgcatacaggaggatttaaagatttt
tttttaaaacctgaattattaagagccataagtgaaagtggttttgagcatccatcagag
gtacagcaagagactattcccgcagctattacaggaaccgatattctttgtcaggccaag
agtggtatgggcaaaacagccgtttttgtgctatcgatattacaacaactagatactaat
gagaaccaagatatgcaggacacaaaagagatgaataatgagaacaacaataataatgga
gagaataagttcgttaggtgtcttggattagcacatactcgagagttggcttatcagata
aagaatgaatttgatagatttagtaaatatttgaaaaatgtacgatgtgaagttgtatat
ggtggtatatcaatgaataagcatataaaattatttaaagaagataacattccacatata
ataataggaacaccaggaagaatattagcattgataagagagaaatatttaattacagat
aaaattcaacattttgtattagatgaatgtgataaatgtttagaaaaattagatatgaga
agtgatgtccagaaaatttttatttcaacacctttaaaaaaacaagttatgtttttttca
gctactatggctaaagaaatgagagatgtgtgtaaaaagtttctacaaaatcctgtggaa
atttttattgatgatgaagctaaattaaaattacacggattattacaacactatgttaaa
ttacaagaaaaggataaaacaagaaaacttatagaaatattagatgcattagaattcaat
caagttattatctttgttaaatcagttactagagctatcacactagataaattattaaca
gaatgtaattttccatccatagctatacatggaggtcttgaacaacaagaaagaattgaa
agatatgataaatttaaaaaatttgaaaacagaatcttagtttcaactgatttattcgga
agaggtatcgatattgaaagagttaatattgttatcaattatgatatgccagaaaattca
gactcctatttacatagagtaggacgtgctggaagatttggaaccaaggggctagccgtt
acttttgtttcttcacaagaagatactttggcattgaatgaagtacaaacaagatttgaa
gttgccatctcagaaatgccaaataaaattgattgtaatgagtacatcaatcagtaa

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