KEGG   Plasmodium gaboni: PGSY75_0215700
Entry
PGSY75_0215700    CDS       T08136                                 
Name
(RefSeq) putative DNA-directed RNA polymerase II second largest subunit
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
pgab  Plasmodium gaboni
Pathway
pgab03020  RNA polymerase
pgab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pgab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PGSY75_0215700
  09124 Replication and repair
   03420 Nucleotide excision repair
    PGSY75_0215700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pgab03021]
    PGSY75_0215700
   03400 DNA repair and recombination proteins [BR:pgab03400]
    PGSY75_0215700
Enzymes [BR:pgab01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PGSY75_0215700
Transcription machinery [BR:pgab03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     PGSY75_0215700
DNA repair and recombination proteins [BR:pgab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PGSY75_0215700
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 29774438
NCBI-ProteinID: XP_018643812
UniProt: A0A151LWN0
LinkDB
Position
2:513291..517369
AA seq 1325 aa
MAVKIEAPYFTNDFVKTEQMSDNDKDPNEQITEDDSWVVIGSFFGSHGLVNQQIESYNDF
IEYRMQEIIDEHPKIEIRPQPQYRSDRDESDSIIYSLKFGQLSLDRPFYDEKNLSNKNLW
PQEARLRNLTYSSAIYIDIEQSTYIIDEATKKPILKEKFIYERINLGRIPLMLKSMFCWT
RGLPENEIADMGECSYDQGGYFIVNGGEKVLVAQERMANNFIYVFKKKQPSKFGWVAEIR
SQMERSQATSGFSVKMKTRGGGSQYGSNKTGGQLVATLPYIRTEISVGILFRALGCTSDR
DILQRIVYDFNDKLMINALRETLEECIEYPTQDVCLDFIGKRGPTVGASREKRILYAKEL
LRKEVLPHMGTNPGVESKKSYFIGYMINRLLLAELGRIKEDDRDHFGKKRLDIAGPLMAS
SFSTYFRKMAKDVRRVLQRQIDNNKPFDVAGAIRSCSQITQGMQYQLATGNWGKDKDGKV
IRTGVAQVLNRLTYSSCLSHLRRLNTPLGREGKMAKPRQLHNTHWGMICPFETPEGQSVG
LVKNLSLMCDISVGTSTNNIYEFLTEWGLESLDEVPPELMKEKVKLFLNGKWVGCFNQID
NLIETLYELRRRCDISPEASIVRDVNSKEIKIFTDSGRAMRPLYVVKNINGENKLRLTKE
HVNNIEKYPETYNWDYLIQEGIIEYIDCEEEETTMISMFIDDLKTGTGYYNNFTHCEIHP
SLILGVCASIIPFSDHNQSPRNTYQSAMGKQAMGIYVTNFNIRLDTLAHLLYYPQKPLVC
TKAMEYLRFRELPAGINAIVAIMCYTGYNQEDSLIMNQSSIDRGLFRSVFYRTYTSEEKQ
QGSLIIESFEKPSVRVVKNLKRGDYTKLDDDGLIAPGIRVLGDDIIIGKVSPNIDDEDDI
IIEKRNTSNSSIQVYNKDSISDNNSSNNNINNIRSSISSNLSFASNLGSSNVLDTLPDSP
INNTYNNININNSSNNSIHGAPSVTSSTPSSTTIFSSGHTAGSSNSNAKYGTTIVSSSKD
DTEIPTLTISSTNVLKQYKKDCSLSLRSNENGVIDTVMLSSNSRGNKFAKVKVRSVRIPQ
IGDKFASRHGQKGTIGITYRTEDMPFSSLGIFPDIIMNPHAVPSRMTIGHLVECLTGKVA
AIEGGEGDATPFSKITVQEISQKLHNLGYEKYGNEMLYNGHNGRMLKSKIFIGPTYYQRL
KHMVEDKIHARSRGPLTMITRQPTEGRSRDGGLRFGEMERDCMISHGSAKMLKERLFEES
DAYRVHVCDNCGLCCIADINKNAYECTVCNSKTNISQIYLPYACKLLFQELMTMAIYPKL
VLEDV
NT seq 3978 nt   +upstreamnt  +downstreamnt
atggctgtaaaaattgaagcaccatattttacgaacgattttgtaaaaacagaacaaatg
agcgataatgataaggaccctaatgaacagattactgaagatgacagctgggttgtgatt
ggatccttttttggaagtcacggtttggtgaatcaacagattgaaagctacaacgatttt
attgaataccgtatgcaagaaattatcgatgaacatccaaagatagaaataagaccacaa
ccacaatatcgaagtgatagagatgagagtgatagtataatatattctttaaaatttggt
cagttatctttagatagaccattttatgatgagaagaatttatcaaataagaatttatgg
ccacaagaagccagattaaggaatttaacatattcttcagcaatatatattgatattgaa
cagtctacttatattatagatgaagctacaaagaaacctatattgaaagaaaagtttata
tatgaaagaataaatttaggtagaatacctttaatgcttaaatctatgttttgttggact
agaggattaccagaaaatgaaattgctgatatgggtgaatgttcttatgaccaaggtggt
tattttattgtgaatggtggtgaaaaggttcttgttgcacaagaaagaatggctaataat
tttatttatgtttttaaaaaaaagcaaccttctaaatttggatgggttgctgaaattcga
tcacaaatggaacgttcacaagctacttcaggattttctgtaaaaatgaaaacaagaggt
gggggttcacaatatggtagtaataaaacaggtggtcaattagttgctaccttaccttat
attagaacagaaatatctgtaggtatattatttagggctttaggttgtacatcagatcgt
gacatattacaaagaattgtatatgattttaatgataaattaatgattaatgctttaaga
gaaacgttagaagaatgtatagaatatccaacacaagatgtttgtttagatttcattgga
aaaagaggaccaactgttggagcttctagagaaaaaagaattttatatgctaaagaatta
ttacgtaaagaagtattaccacatatgggaacgaatccaggtgtggaaagtaaaaaatca
tattttattggatatatgattaatagattattattagccgaattaggtagaattaaagaa
gatgatcgagatcatttcggtaagaaaagattagatattgctggaccattaatggctagt
agtttttctacatattttagaaagatggctaaagatgttagaagagtgttacaaagacaa
attgataataataaacctttcgatgttgctggtgctatacgtagttgctcacagattaca
caagggatgcaataccagctagctactggaaattggggaaaggataaagatggaaaagtt
ataagaactggggttgcacaagtattaaatagattaacatattcttcatgtttatcacat
ttaagacgattaaatacaccattaggtagagaaggtaaaatggctaagcctagacaatta
cataatacacattggggtatgatttgtccatttgaaacaccagaaggacaatcggttggt
ttagtaaaaaatttatcattaatgtgtgatataagtgtaggaacatcaacaaataatata
tatgaatttttaacagaatggggattagaatcattagatgaagttcctcctgaattaatg
aaagaaaaagtgaaattatttttaaatgggaaatgggtaggatgttttaatcaaatagat
aatttaatagaaacattatatgaattaagaagacgatgtgatatatcacctgaagcatct
atagtaagagatgtgaacagtaaagaaataaaaatttttacagattctggtcgagctatg
agacctttatatgttgttaaaaatataaatggtgaaaataaattaagattaacaaaagaa
catgttaataatatagaaaaatatccagaaacttataattgggattatcttatacaagaa
ggtattattgaatatattgattgtgaagaagaagaaacaactatgataagtatgtttatt
gatgatttaaaaacaggaactggttattataataattttacacattgtgaaatacatcca
tcattaatattaggagtttgtgcatctataattccttttagtgatcataatcaaagtcct
cgtaatacttatcaaagtgctatgggaaaacaagctatgggaatatatgtaactaatttt
aatattagattagatacattagctcatttattatattacccacaaaaaccattagtatgt
acaaaggctatggaatatttacgttttagagaactcccagctggtattaatgcaattgta
gctattatgtgttatacaggttataatcaagaagatagtttgattatgaaccaatcatct
attgatcgtggtttatttagaagtgtattttatcgtacttatactagtgaagaaaaacaa
caaggtagtttaattattgaatcttttgaaaaaccatcagtgcgagtagttaagaattta
aaaagaggtgattatacaaaattagatgatgatggattaatagctccaggaattcgtgtt
ttaggagatgatataataattggaaaggtatcaccaaatattgatgatgaagatgatata
ataattgaaaagagaaatacatctaatagtagtattcaagtatataacaaagattccata
tctgataacaatagtagcaataataatattaataatattcgaagtagtataagtagtaat
ctttcctttgcttcaaatttaggatcatcaaacgtgttagatacattaccagattctcct
ataaacaacacctataataatataaatattaataatagtagtaataattcaatacatggt
gctcctagtgttacttcatctactccatctagtactacaatatttagtagtggtcacaca
gcagggagctcaaatagtaatgcaaaatatggcacaacaatagttagtagttcaaaagat
gatacagaaattcctaccttgaccataagttctacaaatgtattaaaacaatataaaaaa
gattgttctttaagtttaagatcaaatgaaaatggtgttatagatactgttatgttatca
tcaaatagtagaggaaataaatttgcaaaggttaaagttcgttcagtacgtataccacaa
attggtgataaattcgctagtagacatggacaaaagggtactattggtattacatataga
acagaagatatgccatttagttcacttggtatttttcctgatattattatgaacccacat
gcagttccttctcgtatgactattggacatttggttgaatgtttaacaggaaaagttgca
gccattgaaggaggagaaggtgatgctacacctttttctaaaataacagttcaagaaatt
tcacaaaaattacataatcttggttatgaaaaatatggaaatgaaatgttatataatgga
cataatggaagaatgttaaagtccaaaatttttattggaccaacatattatcaaagatta
aaacatatggttgaagataaaatacatgcaagaagtagaggaccattaactatgattaca
agacaaccaacagaaggaagatcaagagatggtggtctaagatttggagaaatggaaaga
gattgtatgatatcacatggatctgccaaaatgttaaaagaaagattatttgaagaaagt
gatgcatatcgtgtacatgtttgtgataattgtggtttatgttgtattgctgatattaac
aaaaatgcatatgaatgtactgtttgtaatagtaaaacaaacatatcacaaatttattta
ccatatgcatgtaaattgttattccaagaattgatgacaatggctatctacccaaaactg
gttctagaagatgtataa

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