Plasmodium gaboni: PGSY75_0308600
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Entry
PGSY75_0308600 CDS
T08136
Name
(RefSeq) putative pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
pgab
Plasmodium gaboni
Pathway
pgab03040
Spliceosome
pgab04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGSY75_0308600
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PGSY75_0308600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pgab03041
]
PGSY75_0308600
04121 Ubiquitin system [BR:
pgab04121
]
PGSY75_0308600
03400 DNA repair and recombination proteins [BR:
pgab03400
]
PGSY75_0308600
Enzymes [BR:
pgab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PGSY75_0308600
Spliceosome [BR:
pgab03041
]
Complex B
Other components
Prp19 complex
PGSY75_0308600
Complex C
Prp19-CDC5 complex
PGSY75_0308600
Ubiquitin system [BR:
pgab04121
]
Ubiquitin ligases (E3)
U-box type E3
PGSY75_0308600
DNA repair and recombination proteins [BR:
pgab03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
PGSY75_0308600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
DUF7165
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_Vps41
TBCA
WDR90_beta-prop_4th
Beta-prop_DCAF4
RNase_H_2
zf-Nse
U-box
TSC22
DUF2850
WDR54
CM_2
Motif
Other DBs
NCBI-GeneID:
29774561
NCBI-ProteinID:
XP_018643524
UniProt:
A0A151LVJ3
LinkDB
All DBs
Position
3:270255..271826
Genome browser
AA seq
523 aa
AA seq
DB search
MSIVCTISGQTPEEPVVSKTGYIFEKRLIEKHIINYGICPVSGEVLTLDDLYPIKNEKIV
KPRPITASSIPGLLSIFQTEWDSIISEMFSLRTHVNDIRNELSHSLYQYDAATRVIAKLL
KEKNGYKEEIENLKKQIFELKSSNNVDIYEIGLNEEILEKMQNLAKDLLMNRKKRKIDNV
CSIEQWKDFENTNEFNIHSSTIPGVTCITLDVNKYKYNYNDDHMKHNFFSGGNDGNVYYV
SLNDNKILSKLQGHLKKVNAIISHPSNFICITASNDKTIRIWKGDDNNAHNNDHHDADHS
DDSNNNNQYTYDNSQFVSAHVITKHKDHVTSLALHPLENYFISSSKDSMWILHDLETAKT
IKTSKDNPSSFKHLAIHPDGMMFGIAAQDSNIHIYDIKSQEYKATLNGHTKSLNCLSFSE
NGYYLASSSKDNTVKLWDLRKAQSFQTITLNETPNYISFDYSGKYLSIAVENDIQIYNFE
TKNQANLIKTLSSHTDTVTQTCFGSTTSYILSSSMDKTIKLWN
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatagtatgcaccataagtggtcagacacctgaagaacctgttgtaagtaaaacg
ggatatatatttgaaaagagattaattgaaaaacacataattaattatggcatatgtcca
gtaagtggtgaggttctaacactagatgatttatatccaattaaaaatgaaaagattgtt
aagcctagacctattaccgctagtagtatacctggattactgtcgatttttcaaacagaa
tgggattcgattatatcagaaatgtttagtttaagaacacatgttaatgatatacgtaat
gaattaagtcatagcttatatcaatatgatgctgctacaagagttatagctaaattatta
aaagaaaaaaatggttataaagaagaaatagaaaatttaaaaaaacagattttcgaatta
aaaagtagtaataatgttgatatttatgaaataggattaaatgaagaaatattagaaaaa
atgcaaaatcttgctaaagatttattaatgaatagaaaaaaaagaaaaatagataatgta
tgttctattgaacaatggaaagattttgaaaatactaatgaatttaatattcattcatca
accataccaggagttacttgtattacacttgatgttaataaatataaatataattataat
gatgatcatatgaaacataattttttctctggaggtaatgatggaaatgtttattatgtt
tctctaaatgataataaaatattatcaaaattacaaggacatttaaaaaaagtaaacgca
attatttcacatccatccaattttatatgtataacagcatctaacgataaaaccataaga
atatggaaaggtgatgacaataatgcacataataatgatcatcatgatgctgatcatagt
gatgatagtaataataataatcaatatacatatgacaactcacaatttgtctctgcacat
gttataaccaaacataaagatcatgttacttcattagctttacatcctttggaaaattat
tttattagctcttccaaagatagtatgtggattttacatgatttagaaacagccaaaact
ataaaaacttcaaaagataatccaagttcttttaaacatctagctatacacccagatggt
atgatgtttggtatagcagcacaagattctaatatacatatctatgatattaaaagtcaa
gaatataaagcaacattaaatggacatactaaatctttaaattgtttatcttttagtgaa
aacggttattatttagcatcatcttcaaaagataatacagtcaaattatgggacttaaga
aaagctcaaagctttcaaacgataacattaaatgaaacacccaattatatttcctttgat
tattcaggaaaatatctatccatagctgtagaaaatgatatacaaatatataattttgaa
acaaaaaatcaagctaatctaataaaaacattatcatcacatacagatacggtgacacaa
acatgctttggtagtaccacctcatatattttgtcaagttcaatggataaaaccataaaa
ctttggaattga
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