Plasmodium gaboni: PGSY75_0409600
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Entry
PGSY75_0409600 CDS
T08136
Name
(RefSeq) replication protein A1, large subunit
KO
K07466
replication factor A1
Organism
pgab
Plasmodium gaboni
Pathway
pgab03030
DNA replication
pgab03420
Nucleotide excision repair
pgab03430
Mismatch repair
pgab03440
Homologous recombination
pgab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PGSY75_0409600
03420 Nucleotide excision repair
PGSY75_0409600
03430 Mismatch repair
PGSY75_0409600
03440 Homologous recombination
PGSY75_0409600
03460 Fanconi anemia pathway
PGSY75_0409600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgab03000
]
PGSY75_0409600
03032 DNA replication proteins [BR:
pgab03032
]
PGSY75_0409600
03400 DNA repair and recombination proteins [BR:
pgab03400
]
PGSY75_0409600
Transcription factors [BR:
pgab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PGSY75_0409600
DNA replication proteins [BR:
pgab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PGSY75_0409600
DNA repair and recombination proteins [BR:
pgab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PGSY75_0409600
MMR (mismatch excision repair)
PGSY75_0409600
DSBR (double strand breaks repair)
HR (homologous recombination)
PGSY75_0409600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
29774777
NCBI-ProteinID:
XP_018643324
UniProt:
A0A151LUE3
LinkDB
All DBs
Position
4:complement(296495..299779)
Genome browser
AA seq
1094 aa
AA seq
DB search
MSKNEEILSKATPNFIYKFFTEPNSQESLNWLNGEINLICFSQMNAGANQTFLKVIDGSI
PPQYYAIVHLGIEENNNTISYVKKIISIENFSITNYYGKLFILAKKVTVYLNIDHFDIED
LFKKYHLQSISYFLLNSKNENNSRENYARIANESNNNVNSVNNNSTYSACSGSLPGYTNR
DENKSREYYNRSNDDTNNDVNIKDNYYHNNNHNHNSNNNHNGNNNHINNHNNNHNNNHNN
HNNNHNNHNRGENWEQLRENYKSNEYYNNNEKTYNHNTYNRQNNEHVMKEDNNKSFMTPA
HVNDDNRIDKKPNYIDNTIDKQNRGKFVYKENPNISNYNSNVDDYENKNDLHRSFSSQKS
TNTYNKGPSEYNRNNMCYENNSPGNESYNKNIRSHNNENNNYYYHNNNNNNNNYHHNNNM
NTNPRHATHNQPYDYNNHSRNYDNKNDESSKMYVNSNCVPHATNIVKLNRCDESLHERYF
SIDNNNNNMNSMNSISNNNNNNSVVMGHPSGSYNHENDPNNNHNNNNNNNSCSSKHNNYH
TYDRYVNPANHHQNYNNKDEYTYTNNDDSHIKIRKEDIGSNQELRDYNYNENNMNIIRKD
EKMMKDKTLNRNNRKSTPYQNNAVIKMTDGILMQINKLSQYSSKWIIKARVQSKDNIRRY
TSGSKEGQVFNIELCDEDGEIKANFFGKAVDKWYDFIEVGKIYKIGKGIIKVANKKFNTL
NHDYEITLDENSLIEILDEENENIPKYNYNFISIDNIKNMNTGSFVDIMAIVLNYQEKMQ
IFVKKTGQYKDKRDVILIDESFETIPVTLWEKNACIIDEMNLRDNCIVCFKYLKIGEWQG
KKLESHARTKIEINPSNIEKAYTLKNWWINNKKIICNSINKSSNFINIDTQKTIQEIKKD
VNLANEDTLSGKGIMFTTYGFIDQIYNNMPVYSACPDCNKKMISNSVEENEYEPSSNLLE
ETMYCAKCNKNNIPVYNYYINLKITDSTDSIRASAFANCAKIIMNGLSADEYMKLRQEYI
LQENIENFDIIEKIKLNEFFFRIKVYMTSHMDELKKNYTIIDIAPVGKLLIDNCKYLIKS
IKNLTSKRDIDQEE
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaacgaagagatattatccaaggcaactcccaattttatttacaaatttttt
acagagcccaattctcaagaatcattaaattggttgaatggagaaataaatttgatatgc
tttagtcaaatgaatgcaggagcaaatcagacatttttaaaagtaatagatggatcgata
cctccacaatattatgctatagttcatttaggaattgaagaaaataataatacaatatct
tatgtaaagaaaataattagtattgaaaacttttctataacaaattattatggcaaatta
tttatcttagcaaaaaaagttacagtatatttaaatattgatcattttgatatagaggat
ttatttaaaaaatatcatttacaaagtatatcatattttttattaaattctaaaaatgaa
aataattcaagagaaaactatgctcgtatagcaaatgagagtaacaataatgtgaatagt
gtcaataataatagtacatatagtgcttgtagtggcagtcttccaggatatactaacaga
gatgaaaataaatctagagagtattataatcgttcaaatgatgacactaataatgatgtt
aatataaaggataattactatcacaataataatcataatcacaatagtaataataatcac
aatggtaataataatcatattaataatcataataataatcataataataatcataataat
cataataataatcataataatcataataggggagaaaattgggaacagctcagagagaat
tataaatccaatgaatattataataataatgaaaaaacatataaccataatacttataac
agacaaaacaacgaacatgttatgaaagaagacaataataaaagttttatgacacctgct
catgttaatgacgataatagaatagacaaaaaaccaaattatatagataatactatagat
aaacaaaatcgaggtaaatttgtttataaagaaaatcctaatatatctaattataattcg
aatgtagatgattatgaaaataaaaatgatttacatagatcattttcatcacaaaaaagt
actaatacttataataaaggaccttctgaatataatagaaataatatgtgttatgaaaat
aattctccaggtaatgaatcttataataaaaatattagatcccataataatgaaaataat
aattattattatcataataataataataataataataattaccatcataataataatatg
aatacaaatcctagacacgcgactcataaccaaccatatgattataacaaccatagtaga
aattatgataataaaaatgacgaatcgtcaaaaatgtatgtgaattctaattgtgtacct
catgcaactaacattgtaaaattaaatagatgtgatgaatcattacatgagcgatatttt
tctatagacaataataataataatatgaatagtatgaatagtataagtaataataataat
aataatagtgtggttatgggccaccccagcggcagctacaatcatgaaaacgatccaaat
aacaatcacaataataataataataataatagttgtagtagtaaacataataattatcat
acttatgatagatatgtgaatccagctaaccatcatcagaattataataataaagatgaa
tatacatacacaaataatgacgatagtcatattaaaataagaaaagaagatataggaagt
aaccaagaattaagagattataattataatgaaaataatatgaatattataagaaaggat
gaaaaaatgatgaaggataaaacattaaatagaaataacaggaagagtactccttatcaa
aataatgccgttataaaaatgacagatggtatattaatgcaaataaataaattatcacaa
tattcatctaaatggattattaaggctagagttcaatcaaaagataatataagaagatat
acatctggaagtaaagaaggacaagtatttaacattgaattgtgtgatgaagatggtgaa
ataaaagcaaatttttttggaaaggctgttgacaaatggtatgattttatagaagttgga
aagatttataaaattggtaaaggtataataaaagtagcaaataaaaaatttaatacttta
aatcatgattatgaaattactttagatgagaattctttaatagaaatattagatgaagaa
aatgaaaatattccaaaatataattataattttatatctatagataatataaaaaatatg
aatactggttcatttgtagatattatggctattgtattaaattatcaagaaaaaatgcaa
atatttgttaaaaaaactggacaatataaagataaaagagatgtcatattaatagatgaa
agctttgaaactatacctgtaactttgtgggaaaaaaatgcatgcataattgatgaaatg
aatttaagagataattgtattgtatgctttaaatatttaaaaataggtgaatggcaagga
aaaaaattagaatcacatgcacgtacaaaaattgaaattaatcctagcaatatagaaaaa
gcatatactctaaaaaattggtggattaataataaaaaaattatttgtaattctataaac
aaaagttcaaattttattaatatagatacacaaaaaactatacaagaaattaaaaaagat
gtaaatctagcaaatgaagatacattatctggtaaaggtattatgttcacaacttatggt
tttatagatcaaatttataataatatgccagtatattcagcatgtccagattgtaataaa
aaaatgataagtaattcagtcgaagaaaatgaatatgaaccttcttcaaacttattagaa
gaaactatgtattgtgcaaagtgtaataaaaataatatacctgtctataattattatatt
aatctaaaaattacagatagtactgattctataagagcttccgcatttgctaattgtgct
aaaattattatgaacggattatcagctgatgaatatatgaaactaagacaagaatatata
ctacaagaaaatattgaaaactttgatattatagaaaaaatcaaattaaacgaattcttt
tttcgtattaaagtatatatgacatctcatatggatgagttgaaaaaaaattacacaatc
atagatattgctccagttgggaaacttcttatagataactgtaagtaccttatcaaatct
ataaaaaatctaacctctaaaagggacatagaccaggaagaataa
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