Plasmodium gaboni: PGSY75_0415500
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Entry
PGSY75_0415500 CDS
T08136
Name
(RefSeq) putative nuclear cap-binding protein
KO
K12883
nuclear cap-binding protein subunit 2
Organism
pgab
Plasmodium gaboni
Pathway
pgab03013
Nucleocytoplasmic transport
pgab03015
mRNA surveillance pathway
pgab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGSY75_0415500
09122 Translation
03013 Nucleocytoplasmic transport
PGSY75_0415500
03015 mRNA surveillance pathway
PGSY75_0415500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgab03019
]
PGSY75_0415500
03041 Spliceosome [BR:
pgab03041
]
PGSY75_0415500
Messenger RNA biogenesis [BR:
pgab03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
PGSY75_0415500
Spliceosome [BR:
pgab03041
]
Common components
Common spliceosomal components
Cap binding complex
PGSY75_0415500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
29774822
NCBI-ProteinID:
XP_018643367
UniProt:
A0A151LUK0
LinkDB
All DBs
Position
4:450785..451617
Genome browser
AA seq
234 aa
AA seq
DB search
MAHLYEEVYKKRKYFDRALCNDYEEWQDKIRESKTVYIGNLSIYTTQQQIYEHMSKAGDV
ENIIMGLHRTEKSPCGFCFVVYKKKEGYTQAVNFLNNSILDGRIIRVDEDLGIIGKRKYG
RGKTGIQKRDERNKFYDEDRPKVLDNLVDHTISKKRKLNNNPYYERNIKQKILLPSNYTL
NTTEMKTSRMVYIKPPVTLYPNAQHMMNINKNKHQNRNLYKFHIKKNKQNNKQT
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcacatttatatgaagaggtttataaaaagagaaaatattttgatagagctttatgt
aatgattatgaagaatggcaagataaaataagagaatcaaaaacagtttatataggaaat
ttatctatatatacaacacaacaacaaatatatgagcatatgtctaaggctggcgatgta
gaaaatatcatcatgggtttacatagaaccgagaaatcaccttgtggattttgttttgta
gtttataaaaagaaagaaggatatactcaagcagtaaattttttaaataattcaatttta
gatggcagaattataagagttgatgaagatctaggtattattggtaaacgaaaatatgga
agaggaaaaacaggaattcaaaaaagagatgaacgaaataaattttatgatgaagataga
ccaaaggtattagataacttagttgatcatacaattagtaaaaaaagaaaacttaataat
aatccatattatgaaagaaatataaaacaaaaaatactcttaccgtcaaattatactctt
aatactactgaaatgaaaactagtagaatggtctatataaaaccacctgtaactttatat
ccaaacgctcaacatatgatgaatataaataaaaataaacatcaaaatagaaacttatat
aaatttcatataaaaaaaaataaacaaaataataagcaaacataa
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