Plasmodium gaboni: PGSY75_0422700
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Entry
PGSY75_0422700 CDS
T08136
Name
(RefSeq) putative eukaryotic initiation factor
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pgab
Plasmodium gaboni
Pathway
pgab03013
Nucleocytoplasmic transport
pgab03015
mRNA surveillance pathway
pgab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGSY75_0422700
09122 Translation
03013 Nucleocytoplasmic transport
PGSY75_0422700
03015 mRNA surveillance pathway
PGSY75_0422700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgab03019
]
PGSY75_0422700
03041 Spliceosome [BR:
pgab03041
]
PGSY75_0422700
03009 Ribosome biogenesis [BR:
pgab03009
]
PGSY75_0422700
03012 Translation factors [BR:
pgab03012
]
PGSY75_0422700
Enzymes [BR:
pgab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PGSY75_0422700
Messenger RNA biogenesis [BR:
pgab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PGSY75_0422700
mRNA cycle factors
Stress granule specific factors
PGSY75_0422700
Spliceosome [BR:
pgab03041
]
Complex C
Other components
EJC/TREX
PGSY75_0422700
Ribosome biogenesis [BR:
pgab03009
]
Eukaryotic type
90S particles
Helicases
PGSY75_0422700
Translation factors [BR:
pgab03012
]
Eukaryotic type
Initiation factors
eIF-4
PGSY75_0422700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
BATS
AAA_7
AAA_30
Helicase_RecD
AAA_22
CMS1
PhoH
NACHT
Motif
Other DBs
NCBI-GeneID:
29774883
NCBI-ProteinID:
XP_018643431
UniProt:
A0A151LUP7
LinkDB
All DBs
Position
4:705905..707077
Genome browser
AA seq
390 aa
AA seq
DB search
MEKDDHYKTSEKYEICTSFENIGIDEGLLRGIYAYGFEKPSAIQQRGIKPILNGRDVILQ
SQSGTGKTCVFAVGALNCVNRNLNETQVIILSPTRELAEQTQKVCLALADYIHVTIYCCI
GGKKMSDDIKALNNGVHVISGTPGRIYHMLNLRHLKCKYIKQLVIDEADEMLNKGFKEQV
YDIYRFLSPNTQIILSSATLPQEVLEITNKFMHKPVKILVKRDELTLEGIKQFFVSIEKE
QWKYETLADLYESLTITQAVVFCNTQMKVDWLTKKMLESNFTVCKMHAGMSQSERDDIML
KFRQCKFRVLISTDIWGRGLDVQEVSLVVNYDLPNSRESYIHRIGRSGRFGRKGVAINFV
KNDDIKILRDIEQYYSTQIDEMPMNITELL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggatgatcactataaaacttcagaaaaatatgaaatatgcacaagttttgaa
aatattggaatagatgagggtttactaagaggaatatatgcatacggttttgagaagcca
tctgctattcagcagaggggtataaagcctatattaaatggaagggatgtaattttacaa
agtcagagtggtacaggtaaaacgtgtgtgtttgcagttggtgctttgaattgtgtaaat
aggaatttgaatgagactcaagtaataatattatctccaacaagagaattagctgagcag
actcagaaggtttgtttagcattggctgattatatacatgtgacaatttattgttgcatt
ggtggtaaaaaaatgagtgatgatataaaagctttaaataatggagtacatgttataagt
ggaacccctggtcgtatttatcatatgttaaatttaagacatttaaaatgtaaatatata
aaacagttagtaatagatgaagcagatgaaatgttaaacaaaggatttaaagaacaggta
tatgatatatatcgttttttatcacctaatactcaaataatattatcatctgcaacattg
ccccaagaagtgttagaaataacaaataaatttatgcacaagccagtaaaaatattagta
aaaagagatgaattaacattggaaggaattaagcaattttttgtatctatagaaaaagag
caatggaaatatgagacattggcagatttatatgagagtttaacaataactcaagcagta
gttttttgtaatacacaaatgaaagtggattggctaaccaaaaagatgttggaatcgaat
tttactgtatgtaaaatgcatgcaggaatgagtcaaagtgaaagagatgacataatgttg
aaatttaggcaatgtaaatttcgtgtattaatatctacagatatatgggggagaggttta
gatgtacaagaggtgtcacttgttgtcaattatgatttaccaaattcaagagaaagttat
attcatagaattggtaggagtggaagatttggaagaaaaggagtggctattaattttgta
aaaaatgatgatataaaaatacttagagacattgaacaatattactcaacacaaattgat
gaaatgccaatgaacataacggagttattataa
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