Plasmodium gaboni: PGSY75_0505500
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Entry
PGSY75_0505500 CDS
T08136
Name
(RefSeq) putative DNA mismatch repair protein MSH6
KO
K08737
DNA mismatch repair protein MSH6
Organism
pgab
Plasmodium gaboni
Pathway
pgab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PGSY75_0505500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgab03400
]
PGSY75_0505500
DNA repair and recombination proteins [BR:
pgab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PGSY75_0505500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
29774947
NCBI-ProteinID:
XP_018642990
UniProt:
A0A151LSU9
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Position
5:complement(169924..174039)
Genome browser
AA seq
1314 aa
AA seq
DB search
MVDPKRDNTSASSNKKQSSILSFFKCNEEKTNKASSLMEINNKAHEKEKSSEEKNRMNSK
NKSEKEILGANKKINVLDMFLSKGEMHNNTKIIDNINKEGINGDISCTNKNMNVNESDKM
NNLFLDEENIERSRRNSSDSNVHNNNICDYISKNDSCDIKTNGCNNNVEGLDEESKYQNM
VHNKMVEGKNYLDNIESSTEDDIIIKKKRKIILDSASENECIEEKKNNINKNTGSVDNKL
TNLLYEPNKEIDNNLLLLDNNINNIKKCIEKRKGDDSKKSQELDSLRNKYLNLPISITND
KFRLYIEHYFLYCNTFEFPKWIQPQYIRDINLRSPDHPDYDSTTIWTPPPDHKWAIEYKQ
AHYTPGMQQFWKIKSKNFDKIIFFKMGRFYEIFYIDACLMHTICSLNWMSGEHKPHLGFP
EQSLHFYAKKVINSGHKVVVIEQMETPKELEQRNKESIGPKDKAIKREINEIYTKGTILH
DNMLSAETKYLVCFYFDEIENVTNDDNMTNDDKMKGDNNMRSDDNITSDDNITNDDNNNN
NNNMKHNNSSYNISLYDNKSKCNFGFVVSDIATSYIAVGYCNDDESRIVLRTILAQLCPA
EILYCSKNINKEVLSIFKNIPTSPELTCLNNFPNIISSFDEINKYFENIPPNLDIYKEQS
SVICAFGGFIVYLRSLLLDKKIFRFCKIENYDLFKRENYMVLDATALKHLEILETQSGDT
KNSLYDYVNKTCTNFGARNLRRWICSPLLDCEKIKERLDVVDFLKNNEQVLSLIRLKLRK
LPDIERLLNKICIQASQSERGAVFFDNVVNTKLKEFVTFLNAFKEIDSMLIDVNRMERDG
ELPSRLFQICNTPDTYKDNLKGSYPNIGLITNEFLEKIYFDGDKEYKPAEGCDEDIDKIN
EKEKNVEHKLNNVLEHMKAQLKISTLKFVHAKFKYEVECPDNIPKSFLKNVEITSAKKGY
VRIHNDEIKSLVEKLEDIEQEKKDAIYPFFQKLFHLFYAHYEKYVSACRLIAELDCLQSF
AYVVLNTSFPLTRPILHPMHSKKGEEKTPFLILEDNIHPVVAMLMPNFISNNIYMGCDKE
NQSTLLLTGPNMGGKSTLLRQTAISVILAQIGAFVPCTYCELTIVDKIFTRLGSSDNLFE
GKSTFLVELEDISNLLKQSTKYSLAILDELGRGTSSFDGTAIALSTLEQISDVIKCRCIF
STHYHLLVEEVKHNKNISNYHMSLSIDDEQEKIIFLYKFIKGVCPKSFGIHIAKLAGLPK
EIIDLAHEKSLLFENVTDEFCKIIKYKNITRSLLNQDADEQLVTIFHKYKKEFA
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atggttgatccaaaaagagataacacaagtgcgtcatcgaacaaaaaacagtcctccatt
ttaagtttctttaaatgcaatgaagaaaaaacaaataaagcttcttcactaatggaaata
aataacaaggcacatgaaaaagaaaaaagtagtgaggagaagaaccgaatgaattctaag
aataaaagtgaaaaagaaattttaggggcaaataaaaaaataaatgtgttggatatgttt
ttgtcaaaaggagaaatgcataataacacaaaaataatagataatataaataaggaggga
attaatggagatatatcatgtacaaataaaaatatgaatgtgaatgaaagtgataaaatg
aataatctttttcttgatgaagagaatatagaaagaagcagaagaaattctagtgatagt
aatgttcataataataacatttgtgattatatttctaagaatgatagttgtgatattaaa
acaaatggttgtaataataatgtagaaggtttagatgaggagagtaagtatcaaaatatg
gttcataataaaatggtagaaggtaagaactatttagataatatagaatctagcacagaa
gatgatataattataaaaaagaaaaggaaaataattttagatagtgcaagtgaaaacgaa
tgtatagaagaaaaaaagaataatataaataaaaatactggtagtgtagataataaatta
actaatttattatatgaacctaataaagagattgataataatttattattattagataat
aatataaataatataaaaaaatgtattgaaaaaagaaaaggagatgatagtaaaaaatca
caagaattagattctttaagaaataaatatttaaatttacctattagtataacaaatgat
aaattcagattatatatagaacattattttttatattgtaatacatttgaatttcctaag
tggatacaaccacaatatataagagatataaatctaagaagtccagatcatccagattat
gattccacaactatatggaccccaccacctgatcataaatgggcgatagaatataaacaa
gcacattatactccaggtatgcaacaattttggaagataaaatcaaaaaattttgataaa
attatattttttaaaatgggaagattttatgaaatcttttatatagatgcatgtttaatg
catacaatatgttctttaaattggatgagtggagaacataaaccacatttaggatttcca
gaacaatctttacatttttatgctaaaaaagttattaacagtggtcataaagtagttgtc
attgagcaaatggaaacaccaaaggaattagaacaaagaaataaagaatctataggtcca
aaagataaagcaataaaaagagagatcaacgaaatatatacaaagggaactattttgcat
gataatatgttgagtgctgaaacgaaatatttggtatgtttttactttgatgaaattgaa
aatgtgacaaatgatgataatatgacaaatgatgataaaatgaaaggtgataataatatg
agaagtgatgataatataacaagtgatgataatataacaaatgatgataataataataat
aataataatatgaaacataataatagtagttataatatatccctttatgataacaaaagc
aaatgcaactttggttttgttgttagtgatattgctacttcttatattgcagttggatat
tgtaatgatgacgaatcacgaattgttcttagaaccatattagctcaattatgtcctgca
gaaatattatattgctctaaaaatataaataaagaagttttatcaatatttaaaaacatt
cctacatctccagaattaacttgtttaaataattttccaaacattattagttcatttgat
gaaataaataaatactttgaaaacataccacctaatttagatatatataaagaacaaagt
agtgtcatatgtgcttttggtgggttcattgtttatttaagatctttacttttagacaaa
aaaatatttagattctgtaaaattgaaaactatgatcttttcaaaagagaaaattatatg
gttctagatgctacagctttaaaacatctagaaattttagaaacacaatcaggtgatacc
aagaattctttatatgattatgtaaataaaacatgtacaaattttggtgcaaggaattta
aggagatggatctgtagtccattattagattgtgagaaaataaaagaacgtttagatgta
gttgatttcttaaaaaacaatgaacaagttttgtcacttataagattgaaactaagaaaa
ttacctgacatagaaagattattaaataaaatatgtatacaagcttcacaaagtgaaaga
ggagctgttttttttgataatgttgtaaataccaaattaaaagaatttgttacttttctt
aatgcattcaaagaaatcgattctatgttaatagatgtaaatagaatggaaagagatgga
gaattacctagtcgcctcttccaaatttgtaatacacctgatacatataaagataattta
aaaggttcttatccaaatataggattaataacaaatgaatttttagaaaaaatttatttc
gatggagataaagaatataaaccagcagaaggatgtgatgaagatattgataaaattaat
gaaaaggaaaaaaatgtagaacataaattaaataatgttttagaacatatgaaagcacaa
ttaaaaatatctaccttaaaatttgtacatgcaaaatttaaatatgaagttgaatgtcca
gataatataccaaaatcatttttaaaaaatgttgaaattacatcagcaaaaaaaggttat
gttcgtatacataatgatgaaattaaatctttagttgagaaactagaagatattgaacaa
gaaaaaaaagatgctatatatccattctttcaaaaattgttccatttattttatgctcat
tatgagaaatatgtctctgcatgtagattaatagcagaacttgattgtttacagtctttt
gcttatgtggtcttgaatacgtcttttcctttaactcgtcccatactacaccctatgcat
tctaaaaagggagaggaaaagacgccctttttaattttggaagataacatccatcctgtg
gttgccatgttaatgccgaattttatttcgaacaatatttatatgggatgtgataaagaa
aatcaatctacattattattgacaggtcctaatatgggtggtaaaagtaccttattacgt
caaacagctatttcagtaatattagcacaaataggtgcatttgtcccttgcacttattgt
gaattaacaattgtagataaaatatttactcgtttaggttctagtgataatttatttgaa
gggaaaagtacattcttagtagaattagaagatatttctaacttattaaaacaaagtact
aaatatagtctagctatattagatgaattaggtcgaggtacttcttcttttgatggtact
gcaattgcattatcaacattagaacaaatatctgatgttataaaatgtagatgtatattt
tcaacacattatcatttattagtcgaagaagtcaaacataataaaaatatttcaaattat
catatgagcttaagtattgatgatgaacaagaaaaaattatatttttatataaatttatt
aaaggtgtatgtcctaaatcgtttggtatacatatagccaaattagctggactacctaaa
gaaattattgacttagctcatgaaaaatctttattgtttgaaaatgttacagatgaattc
tgtaaaattattaaatataaaaatataactcgatccttattaaatcaagatgctgatgaa
caactagtaaccatatttcataaatataaaaaggaattcgcataa
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