Plasmodium gaboni: PGSY75_0514100
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Entry
PGSY75_0514100 CDS
T08136
Name
(RefSeq) ATP-dependent DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pgab
Plasmodium gaboni
Pathway
pgab03420
Nucleotide excision repair
pgab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PGSY75_0514100
03430 Mismatch repair
PGSY75_0514100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgab03400
]
PGSY75_0514100
Enzymes [BR:
pgab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PGSY75_0514100
DNA repair and recombination proteins [BR:
pgab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PGSY75_0514100
MMR (mismatch excision repair)
Other MMR factors
PGSY75_0514100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
29775033
NCBI-ProteinID:
XP_018643076
UniProt:
A0A151LT15
LinkDB
All DBs
Position
5:complement(502736..506746)
Genome browser
AA seq
1336 aa
AA seq
DB search
MNLLKNILFNNLSEEQQKIVEIPMNVNLCIIACPGSGKTSTLTARIIKSIIEEKKSIVCI
TFTNYAASDLKDKIMKKINCLIDLSVDNNINQKLFNNKNNNNLSLKNKYTLNNIMHKSKI
KVLNTVVFIGTIHSFCRYILYKYKGTFKILTDFINNNIIKLAFNNFYSSLMNMNKNTHTG
FNEGLDKNSTKGNTENQDTTTNKNNNNNNNNNNNNNNNNNNNNNINDNQPNCIPPQLAYF
LNCMKNSEIKEEDEKEFYEEEHDIQNDSLNEEGNGDADNDNDNNNDDDDDDEFYNYVYNF
KHCNETINDYFENEQVQSMLKKKNIIFLKKKIKLMKYVELYNIQIEINEIEKMFYDEYKK
IFKKAKNIYYDFDDLLIETYRLMKYNIDIRNKILDEWHYVFCDEFQDTNTTQFNILQFFA
NYSVPSTYNQLIDTPKKKNLDNEKINDHHNNSIYNTYNTKQYSQSVQNFFSENKIDQKFC
DQIYFDKHCNNILIQKNKNEQSRGEQSEEKDVFMNLQTVQRQSLLSNKIEDMSSSSISST
YSYLKIEKKQKEKKEKKEHTYYSPTKMDNNNNNNNNNKQSDDKYHKHHLEKENNFFNNNL
NEKNTPVNLKDRSLTVIGDDDQSIYSFRGAHINVFHKFLKDCNCLLFKLSNNFRSTREIV
RVSQNLIINNKTCRIQKQLYTNNIQGNKIQFHAFKTSCDQISYILSEIIYLKKIYNYKYG
DFVILCRTNKTLKETLKSLNNIEIKKKAYKYLMNKFLSDKQKKLLKENEGNKKQLENKNT
NDIYKNISIRNNEINNYKNNQKCEQNVNDFNNIFNIDSFKIPIKELNKKKAFFGSKEIIE
LITFLRFLLNVDDNIIFKKAFKIIKNFKNTNHIINKLTKCQTNQHISNILIEHSNDNIQI
KTQNTKIHKTQQKKNDEILSLFSCIKSITHLFILYKRKTLNKESLRVLDIFTEKELKTIV
DFFFCINYFLKFAAHMNSVYHLVIEVFKKTKFLKRLQTKIQKKRDEENKENNIMKETISQ
QRNDNIESDVIQNIGSDSMKGDHHISDNEQKKMKLINEKQTDECKYGCSQQVIEKRVNQD
NHNNGSNNNNNMYDNNDKNNISHNNNSKDNIYDEAAFTNNVYTTEETNSKNIEEKKGNIK
KRTYLEYIEKHEKTKKYIDHDNNNNNNQQNDCHNNNNDMLDINTVNEIKIKKDLELLFNI
GDKDLKYNEIQNIFIFLEMTTDYKPNLLQQSCLDCLFCFLNDFKNNVHENMLVEKVTLTT
IHKAKGLEWKVVFIINVTEGEIPQTVDSKQDIIEERKIFYVGITRAKFLLYLLCSIQNNN
SSEKNTVSRFINEMNI
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atgaatttattaaaaaatattttatttaataacttatctgaggaacaacagaaaattgtt
gaaattcctatgaatgtaaatttatgtattatagcttgcccaggatcaggcaaaacatct
accttaacagctagaattataaaaagcataatagaagaaaaaaagtctatagtttgtatt
acgtttacaaattatgctgctagtgatttaaaagataagattatgaagaaaataaattgt
ttaatagatttaagtgtagataataatataaatcaaaaattatttaataataaaaataat
aataatcttagtttaaaaaataaatatactttaaataatataatgcataaaagtaaaata
aaagtattaaacacagtggtctttataggaaccatacattctttttgtagatatatcctt
tataagtataaaggaacttttaaaatattaactgattttattaacaataatattattaaa
ttagcctttaataatttctactcttcattgatgaatatgaataaaaatactcacactgga
ttcaacgaggggcttgacaagaacagcaccaagggtaatacagaaaatcaagacactaca
actaataaaaataataataataataataataataataataataataataataataataat
aataataataatatcaatgataaccaacccaattgtataccaccccaattagcatacttc
ttaaattgtatgaaaaactcagaaataaaagaagaagacgaaaaagaattctatgaagaa
gaacatgatatacaaaatgatagtttaaacgaagaaggcaatggtgacgccgataacgat
aacgataataacaacgatgatgatgatgatgatgagttttataattatgtatacaacttt
aaacattgtaatgagacaataaatgattacttcgaaaatgaacaagtacaaagtatgttg
aaaaaaaagaatattatatttttaaaaaaaaaaattaaattaatgaaatatgtagaatta
tataatatacaaatagaaattaatgaaatagaaaagatgttttatgatgaatataaaaaa
atattcaagaaagctaaaaatatatattatgattttgacgatttattaattgaaacatat
cgtctaatgaaatataatatagatataagaaataaaatattagatgaatggcattatgta
ttttgtgatgaatttcaagatacaaatacaacacaatttaatatcttacaattctttgca
aattatagtgttccttcaacatacaatcaattaatagatactccaaaaaaaaaaaatttg
gacaatgaaaaaattaatgatcatcataataattctatttataatacatacaatactaaa
cagtatagtcaaagtgttcaaaacttttttagtgaaaataaaattgatcaaaaattttgt
gatcaaatatattttgataaacattgtaataacatacttatacaaaaaaataaaaatgaa
caatcaagaggtgaacagtctgaagagaaagatgtttttatgaatctacaaacagtgcaa
agacaatctttattatcaaataaaatagaagatatgagttcttcctccatatcttcaaca
tattcatatttaaaaatcgaaaagaaacaaaaagaaaaaaaagaaaaaaaagaacacaca
tattattctcctactaaaatggacaataataataataataataataataataaacaaagt
gacgacaaatatcacaaacaccatttagaaaaagaaaataatttctttaacaataatttg
aacgaaaaaaatactcctgtcaatttaaaagatagaagtcttactgttataggtgatgat
gatcaatcaatatattcttttcgaggtgctcatattaatgtatttcataaatttttaaaa
gattgtaattgtttattatttaaattaagtaataattttagaagtactagagaaattgtt
agagtttctcagaatcttattattaataataaaacatgcagaatacaaaaacaactttat
acaaataatattcaaggaaataaaattcaattccatgcattcaaaacatcttgtgatcaa
atatcttatatattgtctgaaattatttatttaaaaaaaatttataattataaatatgga
gactttgttattttatgtagaacaaacaaaacattaaaagaaacattaaagagtttaaat
aatattgaaattaaaaagaaagcatataaatatttaatgaacaaatttttaagtgataaa
caaaagaaactcttaaaagaaaatgaaggaaataaaaaacaattagaaaataagaacaca
aatgatatatataaaaatatatctataagaaataatgaaataaataattataaaaataat
cagaaatgtgaacaaaatgttaacgactttaataatatatttaatatagatagttttaaa
atacctataaaagaattaaacaaaaaaaaagctttttttggatctaaagaaattattgaa
ttaattacattccttagatttttattgaatgtagatgataatattatatttaaaaaagct
tttaaaataataaaaaatttcaaaaatacaaaccatataataaataaattaacaaaatgt
caaacaaatcaacatatatcaaatattctaattgaacattctaatgataatatacaaata
aaaacacaaaacacaaaaattcataaaacacaacaaaaaaaaaatgatgaaatcttatct
cttttttcatgtattaagagtatcactcacttatttattttgtataaaagaaaaacacta
aataaagaatcattacgtgtattagatatatttacagaaaaagaattaaaaactattgtc
gacttttttttttgtattaattatttcttaaagtttgcggcacatatgaattctgtgtat
cacttagtaatagaagtattcaagaaaacaaaatttttaaaaaggttacaaaccaaaata
cagaagaaaagggatgaagaaaataaggaaaacaatattatgaaagaaaccatatctcaa
caaaggaacgataacattgaatcggatgtgattcaaaatataggtagtgattcaatgaag
ggagaccatcacatcagtgacaatgaacaaaagaaaatgaaattaataaatgaaaaacaa
acggatgagtgtaaatatgggtgttctcagcaggtgatagaaaaaagggtcaaccaggat
aatcataataatggcagtaataataataataatatgtatgataataatgacaaaaataat
ataagtcataataataacagtaaggataatatatatgatgaggccgcatttactaataat
gtatatacaactgaagaaactaattcaaaaaatattgaagagaaaaaaggaaatattaaa
aaacgtacctatttagaatatatagaaaaacatgaaaagacgaaaaaatatattgaccat
gataataataataataataatcaacagaatgattgccataataacaataatgatatgttg
gatattaatactgtgaatgaaattaaaataaaaaaagatctcgaattattatttaatata
ggagataaagatttaaaatataatgaaatacaaaatatttttatcttcttagaaatgaca
acagattataaaccaaacttattacaacaatcatgtttagattgtttattttgttttctt
aatgatttcaaaaataatgtacatgaaaatatgctagtagaaaaagttaccttaacaact
atacataaagcaaaaggattagaatggaaagtagtttttattataaatgtgacagaagga
gaaataccacaaactgttgatagtaaacaagatattattgaagaaagaaaaattttctat
gtaggaattactagagccaaatttttactatatttattatgttcaattcaaaataataat
tcttctgaaaaaaatactgtttcgaggtttattaacgaaatgaatatatga
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