Plasmodium gaboni: PGSY75_0520300
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Entry
PGSY75_0520300 CDS
T08136
Name
(RefSeq) putative U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
pgab
Plasmodium gaboni
Pathway
pgab03018
RNA degradation
pgab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pgab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PGSY75_0520300
09123 Folding, sorting and degradation
03018 RNA degradation
PGSY75_0520300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgab03019
]
PGSY75_0520300
03041 Spliceosome [BR:
pgab03041
]
PGSY75_0520300
Messenger RNA biogenesis [BR:
pgab03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PGSY75_0520300
mRNA degradation factors
5'-3' decay
Lsm complex
PGSY75_0520300
Spliceosome [BR:
pgab03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PGSY75_0520300
Complex C
U2 snRNP components
PGSY75_0520300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
Motif
Other DBs
NCBI-GeneID:
29775095
NCBI-ProteinID:
XP_018643139
UniProt:
A0A151LT89
LinkDB
All DBs
Position
5:741294..741978
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AA seq
103 aa
AA seq
DB search
MLFFTFFQQLAEKNHHVTVELKNDLQISGVLHSVDQYLNIKLTNVSVNNPEKYPHLLSIK
SCFVRGSVVRYVFLPSNEIDVQKLHHMCRQEAKMVAEKEKERK
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgctcttttttacattttttcaacaactagctgagaaaaatcatcatgttactgtcgaa
ttaaaaaatgatttacaaatatcaggagtcttgcattcagttgatcaatatttaaatata
aaattaacgaatgtgtcagtaaataatccggagaaatatcctcatttgttatctataaaa
tcatgttttgttagaggatctgtagttagatatgtattcttaccttcaaatgagattgat
gttcaaaagttacatcatatgtgcagacaagaagcaaaaatggtagccgagaaagaaaaa
gaaaggaaataa
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