KEGG   Plasmodium gaboni: PGSY75_0822800
Entry
PGSY75_0822800    CDS       T08136                                 
Name
(RefSeq) putative U5 snrnp-specific protein
  KO
K12857  Prp8 binding protein
Organism
pgab  Plasmodium gaboni
Pathway
pgab03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pgab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PGSY75_0822800
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pgab03041]
    PGSY75_0822800
Spliceosome [BR:pgab03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    PGSY75_0822800
 Complex C
   U5 SnRNP specific factors
    PGSY75_0822800
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_TEP1_C Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_DCAF12 WD40_RFWD3 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th WD40_like Beta-prop_HPS5 RMC1_N Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 29775972
NCBI-ProteinID: XP_018642320
UniProt: A0A151LNY2
LinkDB
Position
8:802902..803876
AA seq 324 aa
MALIKADTYVLEKDEENEVNERKSGLFCPTMLINSHKGEVYCVNFSSDGKYIASSSFDMT
IMIHNVYNECETISVLRGHKNAVLQAKWLNDDNYICSASADHNLFLWDVECESKLRSFKG
HDSIVNGLDIINYNLFVSCSDDNTLKIWDIRSKRAVHIIKHDFPLLSVCSDKKGEFIFTS
CVDNTIKRYDCKNYILKDTFIGHKDYITGLDINSDETMLASISADESICFWDIQPFACEE
KLLFQLNGPKYNIDYNLIKLSFNNDNLLACGSGDNYLYIYDYKQKILKYSLPGHSSTIND
VAFHPIEDIVASCSSDHTIFLGEI
NT seq 975 nt   +upstreamnt  +downstreamnt
atggctttaattaaagctgatacgtatgttttagaaaaggatgaagaaaatgaagtgaat
gaaaggaaaagcggattattttgtcctactatgttaataaatagtcataaaggagaagtg
tattgtgttaatttttcttctgatggaaaatatattgcatcctcaagttttgatatgact
ataatgattcataatgtatataatgaatgtgaaacaattagtgttttaagaggacataaa
aatgctgtattacaagctaaatggctaaatgatgataattatatatgtagtgcatcagct
gatcataatttatttttatgggatgttgaatgtgaatccaaattaagaagttttaaagga
catgatagtattgttaatggattagatataattaattataatttatttgtttcttgtagt
gatgataatactctaaaaatttgggatatcagaagtaaacgggctgttcatattataaaa
catgatttccctttattgagtgtgtgttcagataagaaaggagaatttatttttacaagt
tgtgttgataatacaataaaaagatatgattgtaagaattatatattaaaagatacattc
ataggtcataaagattatataacaggattagatattaatagtgatgaaacaatgctagct
tcaataagtgcagatgaatctatttgtttctgggatattcaaccttttgcatgtgaagaa
aaattattgtttcaattaaatggaccaaaatataatattgattataatttgattaaatta
tcttttaataacgacaaccttttagcttgtggaagtggagataactatttatatatatat
gattataaacaaaaaatattaaaatattctttacctggtcatagtagtactattaatgat
gttgcttttcatccaattgaagatatcgttgcatcttgttcttcagatcacaccatattt
ttaggagagatatga

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